diff --git a/Analysis.qmd b/Analysis.qmd index 8c4e50d..e7e75a35 100644 --- a/Analysis.qmd +++ b/Analysis.qmd @@ -4,6 +4,10 @@ author: "Alberto Fabbri" format: html --- +::: {.content-hidden} +### Install the necessary packages +::: + ```{r} #| label: setup #| include: false @@ -101,7 +105,7 @@ breast_cancer_fovs <- sort(unique(unlist(breast.cancer.patients$fov))) length(unique(paste(breast.cancer.patients@meta.data$core_serial, breast.cancer.patients@meta.data$stamp))) ``` -## Tissue micro array +### Tissue micro array ```{r} #| label: plot-breast-cancer-stamps @@ -357,9 +361,9 @@ analyze_patient("3") ### Patient 4 ```{r} -analyze_patient("4") #| label: analyze-patient-4 +analyze_patient("4") ``` ### Patient 5