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Can index file be csi format ? #17

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gouwei1 opened this issue Jul 28, 2022 · 0 comments
Open

Can index file be csi format ? #17

gouwei1 opened this issue Jul 28, 2022 · 0 comments

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@gouwei1
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gouwei1 commented Jul 28, 2022

Hi,

The genome's contig is too large to use bai format for indexing with samtools, and I can only use csi format. But REDItools seems not compatible with csi when using REDItoolDenovo.py. Is there any solution ?

Best,
Wei
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