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czi support #4

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jwindhager opened this issue Feb 1, 2021 · 0 comments
Closed

czi support #4

jwindhager opened this issue Feb 1, 2021 · 0 comments
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Bug: Current approach using napari-aicsimageio does not work for images generated by the Bodenmiller Lab slide scanner (tiles are not stitched, possibly due to AllenCellModeling/napari-aicsimageio#9).

Enhancement: create napari reader hook for .czi files that loads the correct (i.e., stitched) image, akin to https://github.com/BodenmillerGroup/slidescanner/blob/master/slidescanner/utils/io.py
@jwindhager jwindhager added bug Something isn't working enhancement New feature or request labels Feb 1, 2021
@jwindhager jwindhager self-assigned this Feb 1, 2021
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