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Converting Focus/Motu/Mash output to CAMI bioboxes format #9

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muslih14 opened this issue Apr 19, 2018 · 0 comments
Open

Converting Focus/Motu/Mash output to CAMI bioboxes format #9

muslih14 opened this issue Apr 19, 2018 · 0 comments

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@muslih14
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Hi Fernando,

I'm looking to convert my output files from FOCUS/Motu/Mash to the CAMI bioboxes format for use in OPAL. This docker is a fantastic tool in that regards. Thank you!

Unfortunately, I'm quite a novice when it comes to running Bioboxes/Docker. This is what I've done so far but I keep getting an error.

docker build -f Dockerfile_focus .
docker run
Error: yaml files '/bbx/mnt/input/biobox.yaml' does not exist.

Could you help guide me in the right direction?

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