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Evaluation

Evaluation tools and associated code used in the CAMI pipeline.

These tools are separated by evaluation type.

  • Assembly -- tools which evaluate assembly results.
  • Binning -- tools which evaulate taxonomic binning.
  • Profiling -- tools which evaluate taxonomic profiling.

####File formats Apart from assembly which works from traditional assembly output formats, Binning and Profiling require result files to be in the CAMI file formats.

A validation tool (validator.py) has been provided, which end-users are encouraged to use in testing their submissions for compliance.