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Rename step doesn't take into account single reads named as _1.fastq #22

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KateSakharova opened this issue Dec 19, 2022 · 0 comments

KateSakharova commented Dec 19, 2022

Some single end reads are named as accession_1.fastq in ENA. But we assume name accession.fastq
Plan:

make sure read names are correct in ENA
modify rename function for single end reads

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