From f8e75a4d90a9054e05454adf627205338e3f217c Mon Sep 17 00:00:00 2001
From: Steve Vissault <s.vissault@yahoo.fr>
Date: Tue, 2 Apr 2024 16:03:14 -0400
Subject: [PATCH] Adjust NAMESPACE

---
 DESCRIPTION            |  3 +--
 NAMESPACE              |  1 +
 R/dbs_integration.R    |  4 ++--
 man/dbs_integration.Rd | 14 ++++++++++++++
 4 files changed, 18 insertions(+), 4 deletions(-)
 create mode 100644 man/dbs_integration.Rd

diff --git a/DESCRIPTION b/DESCRIPTION
index 493058b..ba72509 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -15,8 +15,7 @@ Imports:
     cli (>= 3.6.2),
     readxl (>= 1.4.3),
     tidyr (>= 1.3.1),
-    purrr (>= 1.0.2),
-    janitor (>= 2.2.0)
+    purrr (>= 1.0.2)
 Suggests: 
     devtools  (>= 2.2.0),
     testthat (>= 3.0.0),
diff --git a/NAMESPACE b/NAMESPACE
index 37875ff..406c3a2 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -1,5 +1,6 @@
 # Generated by roxygen2: do not edit by hand
 
+export(dbs_integration)
 export(detect_cens)
 export(remove_cens)
 export(uncensored)
diff --git a/R/dbs_integration.R b/R/dbs_integration.R
index c68981f..2520e26 100644
--- a/R/dbs_integration.R
+++ b/R/dbs_integration.R
@@ -2,7 +2,7 @@
 #'
 #' @description This function is a quick integration procedure among all Excel files.
 #'
-#' @return a data.frame of contaminants
+#' @return a data.frame of all contaminant measurements
 #' @export 
 dbs_integration <- function(){
     contaminants_mapping <- list(
@@ -95,7 +95,7 @@ dbs_integration <- function(){
                 readxl::read_excel(tmp_file, sheet = n) |>
                     dplyr::select("Year", "Location", "SampleID", "Species", s[1]:s[2]) |>
                     dplyr::mutate(source = f$path, conpound_family = n) |>
-                    dplyr::mutate(across(everything(), as.character)) |>
+                    dplyr::mutate(dplyr::across(everything(), as.character)) |>
                     tidyr::pivot_longer(cols = s[1]:s[2], names_to = "variable") |>
                     dplyr::filter(!is.na(value))
             }) |> dplyr::bind_rows()
diff --git a/man/dbs_integration.Rd b/man/dbs_integration.Rd
new file mode 100644
index 0000000..4644776
--- /dev/null
+++ b/man/dbs_integration.Rd
@@ -0,0 +1,14 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/dbs_integration.R
+\name{dbs_integration}
+\alias{dbs_integration}
+\title{Get integrated data}
+\usage{
+dbs_integration()
+}
+\value{
+a data.frame of all contaminant measurements
+}
+\description{
+This function is a quick integration procedure among all Excel files.
+}