v3.0.0

Remove @gmod/binary-parser to avoid CSP violation for use of 'eval'/'new Function'

v2.0.4

Remove fetchSizeLimit
Remove usage of url module

v2.0.3

Update sam header parsing to avoid breaking 'type contract'

v2.0.2

Update buffer-crc32
Update typescript-eslint config and related fixes

v2.0.1

Fix issue parsing header tags with : character

v2.0.0

Add lzma support via xz-decompress. This uses webassembly, so it is a major version bump

v1.7.4

Fix import of bzip2 module

v1.7.3

Fix usage of the 'b' tag under situations in CRA4 where a Uint8Array is received instead of Buffer

v1.7.2

Update README.md with docs

v1.7.1

Re-export CramRecord class for typescript

v1.7.0

Typescript entire codebase, big thanks to @0xorial for taking on this effort!
Update to use webpack 5 for UMD build

v1.6.4

Fix off by one in returning features from getRecordsFromRange

v1.6.3

Optimize CRAM parsing slightly (15% improvement on many short reads). This removes support for big endian machines
Publish src directory for sourceMap

v1.6.2

Publish src directory for better source maps

v1.6.1

Explicitly use pako for browser bundle to help avoid buggy zlib polyfills

v1.6.0

Support CRAMv3.1 (thanks to @jkbonfield for contributing!)
Support bzip codec
Remove localFile from the browser bundle using "browser" package.json field
Add esm module field in package.json

v1.5.9

Fix CRAM not downloading proper records for long reads (pt2, PR #84)

v1.5.8

Fix CRAM not downloading proper records for long reads (pt1, PR #85)

v1.5.7

Add getHeaderText to CRAM to get SAM header

v1.5.6

Remove unnecessary rethor win tinyMemoize error handler
Avoid uncaught promise from constructor

v1.5.5

Fix ability to reload CRAM file after failure
Check if BAI file incorrectly submitted as index for CRAM

v1.5.4

Fix handling of hard clipping

v1.5.3

Improved README
Upgrade to babel 7
Upgrade @gmod/binary-parser
Add fix for 'b', 'q', and 'Q' readFeatures

v1.5.2

Fix off-by-one error in range query
Add webpack cram-bundle.js

v1.5.1

Add fix for when mate is unmapped

v1.5.0

Add lossy-names support
Fix for mate strand

v1.4.3

Make sure mate exists for unmated pair, can exist when coordinate slices of cram file are made via samtools view

v1.4.2

Switch to es6-promisify for ie11
Switch to quick-lru instead of lru-cache for ie11

v1.4.1

Add maxInsertSize for viewAsPairs

v1.4.0

Add viewAsPairs implementation

v1.3.0

Fix tests in node 6
Make cram record unique IDs start at 1 instead of 0 to always be truthy
Implement gamma and subexp codecs

v1.2.0

Add getReadBases docs
Rewrite seq calculation to be much faster
Implement ref fetching for multi-ref slices