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Automatically adjust segmentation model dir #16

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krokicki opened this issue Mar 23, 2022 · 0 comments
Open

Automatically adjust segmentation model dir #16

krokicki opened this issue Mar 23, 2022 · 0 comments
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enhancement New feature or request

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@krokicki
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Enhancement

When overriding the input dir, the segmentation model is downloaded to the new input dir, but the pipeline still looks for it in the shared_dir/input dir. We should update it automatically so that the segmentation model is found.
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enhancement New feature or request
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EASI-FISH Data Analysis Pipeline
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@krokicki