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ci.yml
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name: CI
on:
pull_request:
branches:
- master
- dev
push:
branches:
- master
- dev
tags: '*'
jobs:
test:
name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
runs-on: ${{ matrix.os }}
timeout-minutes: 60
strategy:
fail-fast: false
matrix:
version:
- '1.6'
- '1' # automatically expands to the latest stable 1.x release of Julia.
os:
- ubuntu-latest
arch:
- x64
steps:
- uses: actions/checkout@v2
- uses: julia-actions/setup-julia@v1
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
- name: "Replace julia libstdcxx ubuntu + julia v1.6"
shell: bash
if: ${{ matrix.version == '1.6' && matrix.os == 'ubuntu-latest' }}
# The following is needed for Julia <=1.8.3 on Linux OS
# due to old version of libstcxx used by Julia
# taken from https://github.com/hhaensel/ReplaceLibstdcxx.jl/blob/main/src/ReplaceLibstdcxx.jl
run: |
julia -e '
libs = filter(x -> ! occursin("32", x), getindex.(split.(readlines(pipeline(`ldconfig -p`, `grep libstdc`)), r"\s*=>\s*"), 2))
source_dir = dirname(libs[end])
julia_lib_dir = joinpath(dirname(Sys.BINDIR), "lib", "julia")
julia_lib_file = get(filter(endswith(r"libstdc\+\+.so\.\d+\.\d+\.\d+"), readdir(julia_lib_dir, join = true)), 1, nothing)
julia_lib_version = match(r"so(\.\d+)\.", julia_lib_file).captures[1]
source_lib = get(filter(endswith(r"libstdc\+\+.so\.\d+\.\d+\.\d+"), readdir(source_dir, join = true)), 1, nothing)
julia_lib = joinpath(dirname(Sys.BINDIR), "lib", "julia", "libstdc++.so")
for src in [julia_lib, julia_lib * julia_lib_version]
islink(src) && rm(src, force = true)
symlink(source_lib, src)
@info read(`ls -al $src`, String)
end
'
- uses: actions/cache@v1
env:
cache-name: cache-artifacts
with:
path: ~/.julia/artifacts
key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
restore-keys: |
${{ runner.os }}-test-${{ env.cache-name }}-
${{ runner.os }}-test-
${{ runner.os }}-
- uses: julia-actions/julia-buildpkg@v1
- uses: julia-actions/julia-runtest@v1
env:
JULIA_NUM_THREADS: 2
- uses: julia-actions/julia-processcoverage@v1
- uses: codecov/codecov-action@v4
with:
file: lcov.info
token: ${{ secrets.CODECOV_TOKEN }}
docs:
name: Documentation
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: julia-actions/setup-julia@v1
with:
version: '1'
- run: |
julia -e '
function set_environment_variable(name::AbstractString, value::AbstractString)
github_env = ENV["GITHUB_ENV"]
touch(github_env)
open(github_env, "a") do io
println(io, "$(name)=$(value)")
end
end
event_name = "${{ github.event_name }}"
ref = "${{ github.ref }}"
ref_is_master = ref == "refs/heads/master"
ref_is_dev = ref == "refs/heads/dev"
ref_is_tag = startswith(ref, "refs/tags/")
if event_name == "pull_request"
base_ref = "${{ github.base_ref }}"
head_ref = "${{ github.head_ref }}"
base_repository = "${{ github.repository }}"
head_repository = "${{ github.event.pull_request.head.repo.full_name }}"
is_not_fork = base_repository == head_repository
build_docs = (base_ref == "master") && (head_ref == "dev") && (is_not_fork)
elseif event_name == "push"
build_docs = ref_is_master || ref_is_dev || ref_is_tag
elseif event_name == "schedule"
build_docs = ref_is_master || ref_is_dev
elseif event_name == "workflow_dispatch"
build_docs = ref_is_master || ref_is_dev
else
build_docs = false
end
if build_docs
@info("We will build the docs")
set_environment_variable("BUILD_DOCS", "true")
else
@info("We will NOT build the docs")
set_environment_variable("BUILD_DOCS", "false")
end'
- run: |
julia --project=docs -e '
if ENV["BUILD_DOCS"] == "true"
using Pkg
Pkg.develop(PackageSpec(path=pwd()))
Pkg.instantiate()
end'
- run: |
julia --project=docs -e '
if ENV["BUILD_DOCS"] == "true"
using Documenter: doctest
using FeatureSelection
@info "attempting to run the doctests"
doctest(FeatureSelection)
else
@info "skipping the doctests"
end'
- run: julia --project=docs -e '
if ENV["BUILD_DOCS"] == "true"
@info "attempting to build the docs"
run(`julia --project=docs docs/make.jl`)
@info "successfully built the docs"
else
@info "skipping the docs build"
end'
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }}