From 3b45c1f14335748a410d7dff4d65ac12086829bb Mon Sep 17 00:00:00 2001 From: Rauf Salamzade Date: Wed, 23 Aug 2023 13:02:08 -0500 Subject: [PATCH] Update fai.py --- zol/fai.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/zol/fai.py b/zol/fai.py index dc60d232..3c6fb6bb 100644 --- a/zol/fai.py +++ b/zol/fai.py @@ -1487,8 +1487,8 @@ def plotTreeHeatmap(homologous_gbk_dir, hmm_work_dir, species_tree, plot_phylo_d all_samples_in_tree.add(node.name) if len(all_samples_in_tree.intersection(set(sample_final_lts.keys()))) == 0: - logObject.warning('Unable to generate phylogenetic-heatmap because species tree provided doesn't match target genomes searched against.') - sys.stderr.write('Warning: Unable to generate phylogenetic-heatmap because species tree provided doesn't match target genomes searched against.\n') + logObject.warning('Unable to generate phylogenetic-heatmap because species tree provided doesn\'t match target genomes searched against.') + sys.stderr.write('Warning: Unable to generate phylogenetic-heatmap because species tree provided doesn\'t match target genomes searched against.\n') return gbk_info_dir = hmm_work_dir + 'GeneCluster_Info/'