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Annotating nhoods by continuous covariates #218

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emdann opened this issue May 10, 2022 · 1 comment
Open

Annotating nhoods by continuous covariates #218

emdann opened this issue May 10, 2022 · 1 comment

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@emdann
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emdann commented May 10, 2022

From discussion with Pe'er lab members: to aid exploratory analysis make functions (and show in vignettes) to relate DA logFC to average value for some continuous covariate in nhoods (e.g. pseudotime, latent factor values, gene signature expression).
Possibly simply extending annotateNhoods?

@MikeDMorgan
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I think we could also have some bespoke plotting functions to aid this for continuous variables, akin to the beeswarm plots we have for discrete variables.

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