From 3e9e26f5294b7bc0d40d7e06cb10808afecaee24 Mon Sep 17 00:00:00 2001 From: xec-cm <70643921+xec-cm@users.noreply.github.com> Date: Tue, 27 Feb 2024 09:25:43 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20Microbia?= =?UTF-8?q?lGenomics-IrsicaixaOrg/dar@a2c9d06edd2fc5db0259a3f8a9f9e77470ee?= =?UTF-8?q?4f85=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- 404.html | 4 +- CODE_OF_CONDUCT.html | 4 +- CONTRIBUTING.html | 4 +- LICENSE-text.html | 4 +- LICENSE.html | 4 +- articles/article.html | 128 +++++++++--------- .../figure-html/unnamed-chunk-10-1.png | Bin 267591 -> 264479 bytes .../figure-html/unnamed-chunk-7-1.png | Bin 30637 -> 29962 bytes .../figure-html/unnamed-chunk-8-1.png | Bin 29725 -> 29178 bytes articles/dar.html | 122 ++++++++--------- articles/data_import.html | 124 ++++++++--------- articles/filtering_subsetting.html | 100 +++++++------- articles/import_export_recipes.html | 114 ++++++++-------- articles/index.html | 4 +- authors.html | 8 +- index.html | 5 +- news/index.html | 11 +- pkgdown.yml | 4 +- reference/PrepRecipe-class.html | 4 +- reference/Recipe-class.html | 128 ++++++++++++++++++ reference/abundance_plt-1.png | Bin 191861 -> 191772 bytes reference/abundance_plt.html | 4 +- reference/add_step.html | 4 +- reference/add_tax.html | 4 +- reference/add_var.html | 4 +- reference/bake.html | 4 +- reference/contains_rarefaction.html | 4 +- reference/cool.html | 4 +- reference/corr_heatmap.html | 8 +- reference/dar-package.html | 4 +- reference/exclusion_plt-1.png | Bin 33201 -> 33062 bytes reference/exclusion_plt-2.png | Bin 28482 -> 28309 bytes reference/exclusion_plt.html | 4 +- reference/export_steps.html | 4 +- reference/find_intersections.html | 4 +- reference/get_comparisons.html | 4 +- reference/get_phy.html | 4 +- reference/get_tax.html | 4 +- reference/get_var.html | 4 +- reference/grapes-greater-than-grapes.html | 4 +- reference/import_steps.html | 6 +- reference/index.html | 6 +- reference/intersection_df.html | 4 +- reference/intersection_plt-1.png | Bin 54158 -> 54158 bytes reference/intersection_plt-2.png | Bin 54130 -> 54155 bytes reference/intersection_plt-3.png | Bin 46307 -> 46322 bytes reference/intersection_plt.html | 4 +- reference/metaHIV_phy.html | 4 +- reference/mutual_plt-1.png | Bin 217642 -> 217688 bytes reference/mutual_plt-2.png | Bin 217642 -> 217688 bytes reference/mutual_plt-3.png | Bin 184242 -> 184300 bytes reference/mutual_plt-4.png | Bin 217642 -> 217688 bytes reference/mutual_plt.html | 4 +- reference/otu_table.html | 4 +- reference/overlap_df.html | 4 +- reference/pastry_df.html | 4 +- reference/phy_qc.html | 4 +- reference/prep.html | 16 +-- reference/prep_recipe.html | 4 +- reference/rand_id.html | 6 +- reference/read_data.html | 4 +- reference/recipe.html | 4 +- reference/recipes_pkg_check.html | 4 +- reference/required_deps.html | 4 +- reference/sample_data.html | 4 +- reference/step.html | 4 +- reference/step_aldex.html | 12 +- reference/step_ancom.html | 12 +- reference/step_deseq.html | 12 +- reference/step_filter_by_abundance.html | 6 +- reference/step_filter_by_prevalence.html | 6 +- reference/step_filter_by_rarity.html | 6 +- reference/step_filter_by_variance.html | 6 +- reference/step_filter_taxa.html | 6 +- reference/step_lefse.html | 18 +-- reference/step_maaslin.html | 12 +- reference/step_metagenomeseq.html | 12 +- reference/step_rarefaction.html | 14 +- reference/step_subset_taxa.html | 6 +- reference/step_to_expr.html | 4 +- reference/step_wilcox.html | 14 +- reference/steps_ids.html | 4 +- reference/tax_table.html | 4 +- reference/test_prep_rec.html | 4 +- reference/test_rec.html | 4 +- reference/tidyeval.html | 10 +- reference/to_tibble.html | 4 +- reference/use_rarefy.html | 4 +- reference/zero_otu.html | 4 +- search.json | 2 +- sitemap.xml | 6 +- 91 files changed, 631 insertions(+), 499 deletions(-) create mode 100644 reference/Recipe-class.html diff --git a/404.html b/404.html index a6665eb..c8abdb5 100644 --- a/404.html +++ b/404.html @@ -27,11 +27,11 @@ Skip to contents -