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Add score and penalty flags #2

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harper357 opened this issue Aug 15, 2017 · 0 comments
Open

Add score and penalty flags #2

harper357 opened this issue Aug 15, 2017 · 0 comments

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@harper357
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harper357 commented Aug 15, 2017 •
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We need to add the proper score and penalty flags so that we can figure out what ones work best.

example:
magicblast13 -sra {SRA_SAMPLE} -db {references/CARD} -num_threads 12 -score INT -penalty INT -out {output.sam}
harper357 added a commit that referenced this issue Aug 19, 2017
@harper357
Merge pull request #2 from harper357/commenting&cleanup
99eacaf 
Commenting&cleanup
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