From c21ce4ec7b7a95aa768a81a6bddc038337e7c513 Mon Sep 17 00:00:00 2001 From: Brie Carranza Date: Wed, 22 Nov 2023 09:08:24 -0500 Subject: [PATCH] Fix typo, clarify workaround (#888) --- source/issues/overview.rst | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/source/issues/overview.rst b/source/issues/overview.rst index 1956aa430..9e2e6e9ec 100644 --- a/source/issues/overview.rst +++ b/source/issues/overview.rst @@ -175,8 +175,10 @@ Workarounds: At the time of writing the current version of Safari is version 12. RStudio and Upgrading Singularity 3 to minor version 5 ------------------------------------------------------ -OnDemand RStudio implmentations using Singularity may break when upgrading to Singularity version 3.5 or above. There is an undocumented breaking change where ``LD_LIBRARY_PATH`` is no longer exported to the container by default. Instead the container will default to having ``LD_LIBRARY_PATH=/.singularity.d/libs``. Explicitly exporting the variable by using ``SINGULARITYENV_LD_LIBRARY_PATH="$LD_LIBRARY_PATH" singularity ...`` appears sufficient to fix the issue. +OnDemand RStudio implementations using Singularity may break when upgrading to Singularity version 3.5 or above. There is an undocumented breaking change where ``LD_LIBRARY_PATH`` is no longer exported to the container by default. Instead the container will default to having ``LD_LIBRARY_PATH=/.singularity.d/libs``. + +Workarounds: Explicitly exporting the variable by using ``SINGULARITYENV_LD_LIBRARY_PATH="$LD_LIBRARY_PATH" singularity ...`` appears sufficient to fix the issue. .. _Cyberduck: https://cyberduck.io .. _FileZilla: https://filezilla-project.org/ -.. _Globus Connect Personal: https://www.globus.org/globus-connect-personal \ No newline at end of file +.. _Globus Connect Personal: https://www.globus.org/globus-connect-personal