From 359001c5d9e5fe897f0594968c93a2bf0c7baf95 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Miguel=20=C3=81lvarez=20Herrera?= Date: Mon, 7 Aug 2023 17:25:56 +0200 Subject: [PATCH] Add Snakemake badge --- README.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 60211af..c8c7189 100644 --- a/README.md +++ b/README.md @@ -2,10 +2,11 @@ ![Install workflow](https://github.com/PathoGenOmics-Lab/Case-study-SARS-CoV-2/actions/workflows/install.yml/badge.svg) ![Test workflow](https://github.com/PathoGenOmics-Lab/Case-study-SARS-CoV-2/actions/workflows/test.yml/badge.svg) +[![Snakemake](https://img.shields.io/badge/snakemake-≥7.19-brightgreen.svg?style=flat)](https://snakemake.readthedocs.io) ## Instructions -To run the pipeline, you will need an environment with `snakemake>7.29` +To run the pipeline, you will need an environment with `snakemake` (check [the Snakemake docs](https://snakemake.readthedocs.io/en/stable/getting_started/installation.html)). Then, modify the [target configuration file](config/targets.yaml)