From 2189341b777f9cfbd4813c1064568a01bbb0595e Mon Sep 17 00:00:00 2001
From: Jean-Francois Pombert
Date: Wed, 6 Mar 2024 09:40:42 -0500
Subject: [PATCH] cosmetic edits
---
README.md | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/README.md b/README.md
index cd7719d..84ae8cd 100644
--- a/README.md
+++ b/README.md
@@ -405,7 +405,7 @@ Custom colors for [Circos](https://circos.ca/) plots can be loaded directly from
##### Running SYNY with custom colors loaded from a tab-delimited file:
```Bash
SYNY=~/SYNY_ENCE_CC ## Replace by desired SYNY output directory
-COLORS=~/custom_color_2.txt ## Repplace de desired custom color file
+COLORS=~/custom_color_2.txt ## Replace by desired custom color file
run_syny.pl \
-a $DATA/*.gbff.gz \
@@ -433,7 +433,7 @@ circos \
-##### Listing available custom color presets:
+##### Listing custom color presets available in SYNY:
```
run_syny.pl --list_preset
@@ -443,7 +443,7 @@ chloropicon 20 colors
encephalitozoon 11 colors
```
-##### Running SYNY with a custom colors preset:
+##### Running SYNY with a custom color preset:
```Bash
SYNY=~/SYNY_ENCE_CC_PRESET ## Replace by desired SYNY output directory
@@ -468,7 +468,7 @@ circos \
-outputfile encephalitozoon_blues.png
```
-##### Example of an image generated with Circos and SYNY comparing a total of 3 genomes (using the blues custom color preset):
+##### Example of an image generated with the blues custom color preset: