From 2189341b777f9cfbd4813c1064568a01bbb0595e Mon Sep 17 00:00:00 2001 From: Jean-Francois Pombert Date: Wed, 6 Mar 2024 09:40:42 -0500 Subject: [PATCH] cosmetic edits --- README.md | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index cd7719d..84ae8cd 100644 --- a/README.md +++ b/README.md @@ -405,7 +405,7 @@ Custom colors for [Circos](https://circos.ca/) plots can be loaded directly from ##### Running SYNY with custom colors loaded from a tab-delimited file: ```Bash SYNY=~/SYNY_ENCE_CC ## Replace by desired SYNY output directory -COLORS=~/custom_color_2.txt ## Repplace de desired custom color file +COLORS=~/custom_color_2.txt ## Replace by desired custom color file run_syny.pl \ -a $DATA/*.gbff.gz \ @@ -433,7 +433,7 @@ circos \

-##### Listing available custom color presets: +##### Listing custom color presets available in SYNY: ``` run_syny.pl --list_preset @@ -443,7 +443,7 @@ chloropicon 20 colors encephalitozoon 11 colors ``` -##### Running SYNY with a custom colors preset: +##### Running SYNY with a custom color preset: ```Bash SYNY=~/SYNY_ENCE_CC_PRESET ## Replace by desired SYNY output directory @@ -468,7 +468,7 @@ circos \ -outputfile encephalitozoon_blues.png ``` -##### Example of an image generated with Circos and SYNY comparing a total of 3 genomes (using the blues custom color preset): +##### Example of an image generated with the blues custom color preset: