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CITATION.cff
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cff-version: 1.2.0
abstract: |
Ancient metagenomics applies cutting-edge metagenomic methods to the degraded DNA content of archaeological and palaeontological specimens. The rapidly growing field is currently uncovering a wealth of novel information for both human and natural history.
This book takes readers through the main steps of ancient metagenomic bioinformatic workflows, from the basics of familiarising students with the command line, demonstrating how to process next-generation-sequencing (NGS) data, and all the way to showing how to perform perform de novo metagenomic assembly. Focusing on host-associated ancient metagenomics, the book consists of a combination of theory and hands-on exercises, allowing readers to become familiar with the types of questions and data researchers work with.
authors:
- family-names: Fellows Yates
given-names: James A.
orcid: https://orcid.org/0000-0001-5585-6277
- family-names: Warinner
given-names: Christina
orcid: https://orcid.org/0000-0002-4528-5877
- family-names: Andrades Valtueña
given-names: Aida
orcid: https://orcid.org/0000-0002-1737-2228
- family-names: Borry
given-names: Maxime
orcid: https://orcid.org/0000-0001-9140-7559
- family-names: Guellil
given-names: Meriam
orcid: https://orcid.org/0000-0002-7235-4604
- family-names: Herbig
given-names: Alexander
orcid: https://orcid.org/0000-0003-1176-1166
- family-names: Hiß
given-names: Alina
orcid: https://orcid.org/0000-0001-8654-134X
- family-names: Hübner
given-names: Alexander
orcid: https://orcid.org/0000-0003-3572-9996
- family-names: Kocher
given-names: Arthur
orcid: https://orcid.org/0000-0002-9499-6472
- family-names: Lamnidis
given-names: Thiseas C.
orcid: https://orcid.org/0000-0003-4485-8570
- family-names: Michel
given-names: Megan E.
orcid: https://orcid.org/0000-0002-5484-7974
- family-names: Nota
given-names: Kevin
orcid: https://orcid.org/0000-0002-4744-5205
- family-names: Oskolkov
given-names: Nikolay
orcid: https://orcid.org/0000-0001-5326-8893
- family-names: Pach
given-names: Aleksandra Laura
orcid: https://orcid.org/0009-0009-0940-9500
- family-names: Pérez
given-names: Vilma
orcid: https://orcid.org/0000-0001-7996-2189
- family-names: Schmid
given-names: Clemens
orcid: https://orcid.org/0000-0003-3448-5715
- family-names: Velsko
given-names: Irina M.
orcid: https://orcid.org/0000-0001-9810-9917
- family-names: Warner
given-names: Robin
- family-names: Zampirolo
given-names: Giulia
orcid: https://orcid.org/0009-0001-0145-1538
- family-names: Zeibig
given-names: Teresa
orcid: https://orcid.org/0009-0000-2068-3505
title: "Introduction to Ancient Metagenomics"
version: 2024
doi: 10.5281/zenodo.8027280
date-released: 2024-09-17
license: CC-BY-4.0
license_url: https://github.com/SPAAM-community/intro-to-ancient-metagenomics-book/blob/2024.1/LICENSE
keywords:
- "ancient metagenomics"
- metagenomics
- "ancient DNA"
- palaeogenomics
- textbook
- introductory
- bioinformatics
- microbiome
- pathogen
repository-code: "https://github.com/SPAAM-community/intro-to-ancient-metagenomics-book"
url: "https://spaam-community.org/intro-to-ancient-metagenomics-book/"
type: book