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[Story] Develop the ETL pipeline for the EDAM ontology #2546

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tschaffter opened this issue Mar 4, 2024 · 2 comments
Open
3 tasks done

[Story] Develop the ETL pipeline for the EDAM ontology #2546

tschaffter opened this issue Mar 4, 2024 · 2 comments
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@mdsage1
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data/processing

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@tschaffter
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tschaffter commented Mar 4, 2024 •
edited by mdsage1
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What product(s) is this story for?

OpenChallenges

As a user, I want

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Description

The goal of this story is to update the existing openchallenges-edam-etl to effectively load the EDAM ontology into the OC Challenge Service DB.

Acceptance criteria

  • The command nx serve-detach openchallenges-edam-etl loads the data into the challenge service DB.
  • The file edam_concept.csv is removed from the challenge service codebase.

Tasks

Anything else?

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Have you linked this story to a GitHub Project?

  • I have linked this story to a GitHub Project and set its metadata.
@mdsage1 mdsage1 mentioned this issue Mar 14, 2024
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@tschaffter
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Added to Sprint 24.4

@tschaffter
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Added to Backlog

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