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Update fmsi to 0.3.0 #51571

Merged
merged 1 commit into from
Oct 22, 2024
Merged

Update fmsi to 0.3.0 #51571

merged 1 commit into from
Oct 22, 2024

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Update fmsi: 0.2.40.3.0

install with bioconda Conda

Info Link or Description
Recipe recipes/fmsi (click to view/edit other files)
Summary FMSI - memory efficient k-mer set index based on masked superstrings and Burrows-Wheeler transform.
Home https://github.com/OndrejSladky/fmsi
Releases https://github.com/OndrejSladky/fmsi/tags
Author @OndrejSladky

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 22, 2024
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coderabbitai bot commented Oct 22, 2024

📝 Walkthrough

Walkthrough

The pull request introduces updates to the meta.yaml file for the fmsi package. Key changes include an increment in the version number from "0.2.4" to "0.3.0" and an updated SHA256 checksum, changing from "67c930b8bad30e786fb7a59cc8592e1a7231024debc95af7e2c203bb7022b0b3" to "441d9f5808c7568ae237b5bb45db9328185fee43628eb0a4407ae7da0bdcf3bc". Additionally, the build number has been modified from 1 to 0. The source URL has been updated to point to the new version in the tarball link. The patches section remains unchanged, and there are no alterations to the dependencies listed under build, host, or run in the requirements section. The test commands and the about section, which includes home, license, summary, and URLs, have not been modified. The extra section, including identifiers and additional platforms, also remains intact.

Possibly related PRs

  • Update FMSI to v0.3.0 #51566: This PR updates the meta.yaml file for the fmsi package, changing the version from "0.2.4" to "0.3.0" and updating the SHA256 checksum, which directly relates to the changes made in the main PR.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between ee5017d and 10b6738.

📒 Files selected for processing (1)
  • recipes/fmsi/meta.yaml (2 hunks)
🧰 Additional context used
🪛 yamllint
recipes/fmsi/meta.yaml

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

🔇 Additional comments (3)
recipes/fmsi/meta.yaml (3)

16-16: LGTM! Build number correctly reset.

The build number has been properly reset to 0 with the version update, following bioconda best practices.


Line range hint 1-60: Package structure maintained correctly.

The recipe maintains all necessary components:

  • Dependencies remain appropriate for the package
  • Test commands are preserved
  • Documentation links are correctly templated with the new version
  • DOIs and platform support are maintained

1-2: Verify version and checksum against upstream release.

The version bump and checksum update need verification against the upstream release.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


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@mencian mencian merged commit 4c98fb3 into master Oct 22, 2024
3 of 6 checks passed
@mencian mencian deleted the bump/fmsi branch October 22, 2024 21:15
mencian added a commit that referenced this pull request Oct 22, 2024
mencian added a commit that referenced this pull request Oct 22, 2024
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