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Update auspice to 2.59.0 #51575

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merged 2 commits into from
Oct 22, 2024
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  • Update auspice to new version
  • Update list of supported Node.js versions

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coderabbitai bot commented Oct 22, 2024

📝 Walkthrough

Walkthrough

The pull request involves an update to the meta.yaml file for the auspice package. The version number has been changed from "2.58.0" to "2.59.0," and the SHA256 checksum has been updated to reflect the new version. Additionally, the requirements for Node.js in both the build and run sections have been modified to include version 22, expanding the previously supported versions of 16., 18., and 20.*. No other modifications to the structure or content of the file have been made.

Possibly related PRs

  • Update Hsdecipher #51093: This PR updates the version and SHA256 checksum in the meta.yaml file for the HSDecipher package, similar to the version and checksum updates in the main PR for the auspice package.
  • update Hsdecipher des #51023: This PR updates the SHA256 checksum in the meta.yaml file for the hsdecipher package, which is relevant as it involves a checksum update similar to the one in the main PR.

Suggested labels

please review & merge

Suggested reviewers

  • bgruening

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 941148a and 950295a.

📒 Files selected for processing (1)
  • recipes/auspice/meta.yaml (3 hunks)
🧰 Additional context used
🪛 yamllint
recipes/auspice/meta.yaml

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

🔇 Additional comments (4)
recipes/auspice/meta.yaml (4)

Line range hint 12-15: LGTM! Appropriate version pinning strategy

The run_exports configuration with max_pin="x.x" correctly ensures compatibility with minor version updates, following semantic versioning principles.


Line range hint 1-58: Overall changes look good

The recipe update follows Bioconda guidelines with appropriate:

  • Version bump
  • Checksum update
  • Build number reset
  • Version pinning strategy
  • Dependency management

Note: The yamllint error can be ignored as it's a false positive for Jinja2 templates.


23-23: Verify Node.js 22.x compatibility

While adding Node.js 22.* support expands compatibility, please verify:

  1. That auspice 2.59.0 has been tested with Node.js 22
  2. That Node.js 22 is stable enough for production use
#!/bin/bash
# Description: Check if auspice explicitly documents Node.js version support

# Search for Node.js version requirements in package.json
curl -sL https://registry.npmjs.org/auspice/-/auspice-2.59.0.tgz | \
  tar xzf - -O package/package.json | \
  jq -r '.engines.node'

# Look for any Node.js version related information in README
curl -sL https://registry.npmjs.org/auspice/-/auspice-2.59.0.tgz | \
  tar xzf - -O package/README.md | \
  grep -i "node"

Also applies to: 30-30


1-1: Verify package integrity

Let's verify that the SHA256 checksum matches the published NPM package.

Also applies to: 9-10

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


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@mencian mencian merged commit 7664e5a into bioconda:master Oct 22, 2024
7 checks passed
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