From 1e77921cb47dc1f829342fa0714150cd7a1c1792 Mon Sep 17 00:00:00 2001 From: Benjamin Blankenmeister Date: Thu, 10 Oct 2024 22:44:42 -0400 Subject: [PATCH] another pg attempt --- .github/workflows/unit_tests.yaml | 2 +- charts/seqr-platform/Chart.lock | 6 +++--- charts/seqr-platform/Chart.yaml | 4 ++-- charts/seqr/values.yaml | 2 +- 4 files changed, 7 insertions(+), 7 deletions(-) diff --git a/.github/workflows/unit_tests.yaml b/.github/workflows/unit_tests.yaml index 6b40841..dfbb395 100644 --- a/.github/workflows/unit_tests.yaml +++ b/.github/workflows/unit_tests.yaml @@ -34,7 +34,7 @@ jobs: - name: Chart Lint run: ct lint --all - name: Create folder - run: sudo mkdir -p /var/seqr; sudo chmod 666 /var/seqr + run: sudo mkdir -p /var/seqr; sudo chmod 777 /var/seqr - name: Create kind cluster uses: helm/kind-action@v1.8.0 with: diff --git a/charts/seqr-platform/Chart.lock b/charts/seqr-platform/Chart.lock index b8d26da..47af34d 100644 --- a/charts/seqr-platform/Chart.lock +++ b/charts/seqr-platform/Chart.lock @@ -4,12 +4,12 @@ dependencies: version: 1.1.13-dev - name: pipeline-runner repository: https://broadinstitute.github.io/seqr-helm - version: 0.1.13-dev + version: 0.1.14-dev - name: hail-search repository: https://broadinstitute.github.io/seqr-helm version: 0.2.10-dev - name: lib repository: https://broadinstitute.github.io/seqr-helm version: 0.1.4 -digest: sha256:8b94d568d4ba828676204f8deba918ffefb63a0f5faed3f07b3b3329eca81feb -generated: "2024-10-10T18:36:41.094876-04:00" +digest: sha256:734f95db1cdd869847897f6b082d7a77e88126e40b47dd2c24949ad20fdca880 +generated: "2024-10-10T22:12:09.088046-04:00" diff --git a/charts/seqr-platform/Chart.yaml b/charts/seqr-platform/Chart.yaml index df908dd..5d9c48d 100644 --- a/charts/seqr-platform/Chart.yaml +++ b/charts/seqr-platform/Chart.yaml @@ -9,13 +9,13 @@ maintainers: - name: seqr email: seqr@broadinstitute.org type: application -version: 0.1.18-dev +version: 0.1.19-dev dependencies: - name: seqr version: 1.1.13-dev repository: "https://broadinstitute.github.io/seqr-helm" - name: pipeline-runner - version: 0.1.13-dev + version: 0.1.14-dev repository: "https://broadinstitute.github.io/seqr-helm" condition: pipeline-runner.enabled - name: hail-search diff --git a/charts/seqr/values.yaml b/charts/seqr/values.yaml index 4eb1d7d..10774ca 100644 --- a/charts/seqr/values.yaml +++ b/charts/seqr/values.yaml @@ -149,7 +149,7 @@ postgresql: chown -R `id -u`:`id -G | cut -d " " -f2` {{ .Values.postgresqlDataDir }} # In theory this block is template-able but is getting wrapped in single quotes. securityContext: - runAsGroup: 0 + runAsGroup: 1001 runAsNonRoot: false seLinuxOptions: {} seccompProfile: