From 24de6c513f848ba9375be6d4494d9085253b432e Mon Sep 17 00:00:00 2001 From: Benjamin Blankenmeister Date: Fri, 11 Oct 2024 15:14:05 -0400 Subject: [PATCH] bump pipeline runner with docker --- charts/pipeline-runner/Chart.yaml | 4 ++-- charts/pipeline-runner/values.yaml | 6 ++++++ kind.yaml | 2 ++ 3 files changed, 10 insertions(+), 2 deletions(-) diff --git a/charts/pipeline-runner/Chart.yaml b/charts/pipeline-runner/Chart.yaml index 57556d6..b902930 100644 --- a/charts/pipeline-runner/Chart.yaml +++ b/charts/pipeline-runner/Chart.yaml @@ -8,8 +8,8 @@ maintainers: - name: seqr email: seqr@broadinstitute.org type: application -version: 0.1.15-dev -appVersion: "92f827224f608388fc4e20be60a08b1f675c7408" +version: 0.1.16-dev +appVersion: "ffa085dca1e1c8a4a168345468f795a141dd63f1" dependencies: - name: lib version: 0.1.4 diff --git a/charts/pipeline-runner/values.yaml b/charts/pipeline-runner/values.yaml index 83809af..60c75f7 100644 --- a/charts/pipeline-runner/values.yaml +++ b/charts/pipeline-runner/values.yaml @@ -15,6 +15,9 @@ volumes: |- persistentVolumeClaim: readOnly: false claimName: {{ include "lib.pvc-name" . }} + - name: docker-socket + hostPath: + path: /var/run/docker.sock - name: luigi-config configMap: name: luigi-config @@ -25,6 +28,9 @@ volumeMounts: |- - name: seqr-datasets mountPath: /var/seqr readOnly: false + - name: docker-socket + mountPath: /var/run/docker.sock + readOnly: false - name: luigi-config mountPath: /etc/luigi/luigi.cfg subPath: luigi.cfg diff --git a/kind.yaml b/kind.yaml index 09e347f..27cad8c 100644 --- a/kind.yaml +++ b/kind.yaml @@ -6,6 +6,8 @@ nodes: - hostPath: /var/seqr containerPath: /var/seqr readOnly: false + - hostPath: /var/run/docker.sock + containerPath: /var/run/docker.sock extraPortMappings: - containerPort: 30950 # the seqr app exposes a NodePort on this port hostPort: 80