From 57a04c79021650d17e3b308389e3015771040fc3 Mon Sep 17 00:00:00 2001 From: ekiernan Date: Tue, 16 Jul 2024 13:19:35 -0400 Subject: [PATCH] added comma --- tools/scripts/create_h5ad_optimus.py | 2 +- tools/scripts/create_snrna_optimus_exons_h5ad.py | 2 +- tools/scripts/create_snrna_optimus_full_h5ad.py | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/tools/scripts/create_h5ad_optimus.py b/tools/scripts/create_h5ad_optimus.py index c417b0ea..be82fd83 100755 --- a/tools/scripts/create_h5ad_optimus.py +++ b/tools/scripts/create_h5ad_optimus.py @@ -153,7 +153,7 @@ def generate_col_attr(args): # Split the pandas DataFrame into different data types for storing in the ZARR IntColumnNames = [ # UInt "n_reads", - "tso_reads" + "tso_reads", "noise_reads", "perfect_molecule_barcodes", "reads_mapped_exonic", diff --git a/tools/scripts/create_snrna_optimus_exons_h5ad.py b/tools/scripts/create_snrna_optimus_exons_h5ad.py index 2e1ccd14..b69ba954 100644 --- a/tools/scripts/create_snrna_optimus_exons_h5ad.py +++ b/tools/scripts/create_snrna_optimus_exons_h5ad.py @@ -146,7 +146,7 @@ def generate_col_attr(barcode_1_path,barcode_2_path,cell_metrics_path): # Split the pandas DataFrame into different data types for storing in the ZARR IntColumnNames = [ # UInt "n_reads", - "tso_reads" + "tso_reads", "noise_reads", "perfect_molecule_barcodes", "reads_mapped_exonic", diff --git a/tools/scripts/create_snrna_optimus_full_h5ad.py b/tools/scripts/create_snrna_optimus_full_h5ad.py index 768e2309..4da9ca31 100755 --- a/tools/scripts/create_snrna_optimus_full_h5ad.py +++ b/tools/scripts/create_snrna_optimus_full_h5ad.py @@ -143,7 +143,7 @@ def generate_col_attr(args): # Split the pandas DataFrame into different data types for storing in the ZARR IntColumnNames = [ # UInt "n_reads", - "tso_reads" + "tso_reads", "noise_reads", "perfect_molecule_barcodes", "reads_mapped_exonic",