Some code to analyze hex maze data.
plot_ramps.ipynb plots dopamine ramps as the rat approaches a reward port.
sharp_wave_ripple_analysis.ipynb replicates some of Tim's analysis and investigates if post-reward SWRs are used to update place values (aka if hex DA is higher after hexes have been represented in SWRs).
theta_sweeps.ipynb is my sandbox for investigating the role of theta sweeps in the decision process.
PS - The Hex-maze repo is imported as a module for this repo. I think everything should work if you clone it normally? Idk