Releases: cancerit/cgpRna
Releases · cancerit/cgpRna
2.1.6 - No fusions found no longer crashes
6a6396a
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keiranmraine
Keiran Raine
Simple fix to ensure outputs always have content.
Hotfix - 2.1.5
Fixing the cpanm source url
Hotfix - 2.1.3
- Correcting samplename.bas to .bam.bas
Hotfix - 2.1.2
Fixed tophat-fusion-post issue in local tophat fork added tophat v2.1.0a to setup.sh script
Bugfix release 2.1.1
changed python installation name for htseq
Release 2.1.0
Added HTSeq as read counting method
v2.0.18 - Reinstating test script compatible with Bio::DB::HTS changes
Merge tag '2.0.18' into dev Reinstating test script 2 which should be compatible with the Bio::DB::HTSlib changes
v2.0.17 - Bugfix: correcting format of version to remove non numeric character
Merge tag '2.0.17' into dev Correcting issue with version not being numeric
v2.0.16 - More recent version of STAR implemented
- version 2.5.0c of STAR included in the setup.sh script which has been successfully tested with the pipeline
- installation of STAR and STAR-Fusion broken out in the setup.sh script
- added Grass annotation as a sub-routine in script compare_overlapping_fusions.pl rather than a separate script
v2.0.14 - enablng error messages to be displayed in LSF logs
Uncommenting line so that error messages are written to the LSF log#