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dnds subworkflow #36

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10 tasks
nicola-calonaci opened this issue May 30, 2024 · 0 comments
Open
10 tasks

dnds subworkflow #36

nicola-calonaci opened this issue May 30, 2024 · 0 comments
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@tucano

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@nicola-calonaci
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Implement a workflow that determines the statistics for the ratio of synonymous to non-synonymous mutations throughout the whole genome, and across the immuno-peptidome.

  • Module implementation

    • dndsCV module
    • SOPRANO module

  • Tests

    • Test scripts locally
    • Test sub-workflow independently
    • Test whole pipeline

  • Reports

    • Individual plots
    • Comprehensive report
@tucano tucano self-assigned this Jun 21, 2024
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@tucano @nicola-calonaci