NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(plot,rcongasplus)
S3method(print,rcongasplus)
export("%>%")
export(auto_config_run)
export(auto_normalisation_factor)
export(build_clone_tree)
export(create_congas_tibble)
export(filter_counts_by_quantile)
export(filter_known_genes)
export(filter_missing_data)
export(filter_outliers)
export(filter_segments)
export(fit_congas)
export(generate_random_tree)
export(get_fit)
export(get_input)
export(init)
export(plot_data)
export(plot_fit)
export(run_simulation)
export(segments_selector_congas)
export(stat)
import(CNAqc)
import(Matrix)
import(dplyr)
import(ggplot2)
importFrom(cli,cli_alert)
importFrom(cli,cli_alert_danger)
importFrom(cli,cli_alert_info)
importFrom(cli,cli_alert_warning)
importFrom(cli,cli_h3)
importFrom(cli,cli_rule)
importFrom(cowplot,plot_grid)
importFrom(crayon,bgBlue)
importFrom(crayon,bgCyan)
importFrom(crayon,bgGreen)
importFrom(crayon,bgMagenta)
importFrom(crayon,bgRed)
importFrom(crayon,bgWhite)
importFrom(crayon,bgYellow)
importFrom(crayon,blue)
importFrom(crayon,red)
importFrom(crayon,underline)
importFrom(graphics,curve)
importFrom(graphics,hist)
importFrom(gtools,mixedsort)
importFrom(magrittr,"%>%")
importFrom(progress,progress_bar)
importFrom(readr,read_delim)
importFrom(readr,write_tsv)
importFrom(reshape2,acast)
importFrom(reshape2,melt)
importFrom(stats,complete.cases)
importFrom(stats,dgamma)
importFrom(stats,quantile)
importFrom(stats,rnorm)
importFrom(stats,sd)
importFrom(stats4,mle)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,separate)
importFrom(tidyr,unite)
importFrom(utils,head)
importFrom(utils,object.size)