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restapidoc.json
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restapidoc.json
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{
"basePath": "Fill with basePath config",
"apis": [
{
"methods": [
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "2db4f69f-39be-483e-abde-089793283799",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "9382449c-4d5a-46cf-bc64-df05155253ac",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "f1d03467-1323-4c00-aa9e-2efdf9e919d1",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Set name of a feature",
"queryparameters": [
{
"jsondocId": "ddfadddb-a699-4940-9a17-93e44142c59c",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "d062c294-529f-4eb5-9587-1232d8758783",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "a7aca1d9-7af2-4f09-a56a-f003712f51bc",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "c200009d-ded4-4f1e-9d76-7355e0988fe3",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "7e2b6d7a-32de-44d9-b536-bfffd8bb2fff",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','name':'gene01'}",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/setName",
"produces": ["application/json"],
"methodName": "setName"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "5c227e53-96e4-45f0-be24-1fe00c16bcc8",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "f3486744-6fbf-4e1d-bebd-7c63095afc08",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "99ce89d6-efed-477a-a40b-032f7036e6fd",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Set status of a feature",
"queryparameters": [
{
"jsondocId": "3047dce0-fd01-430f-bfba-fdabc628f9fb",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "713aa14c-8f47-46ad-b4f0-f29b70af9cbe",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "b99718ce-0929-4300-9b11-12403a67ae94",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "3ba6ce10-b3bf-4e11-a701-758ba39be85a",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "8d9b096f-1e3d-44c9-a816-93e0ebdb3e7b",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','status':'existing-status-string'}. Available status found here: /availableStatus/ ",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/setStatus",
"produces": ["application/json"],
"methodName": "setStatus"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "fad39e7d-da19-4655-ae49-be167187586a",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "66fcd944-4b83-47af-afea-8fd902a839a5",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "41fe0846-f544-4e91-a45f-deede91961fa",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Add attribute (key,value pair) to feature",
"queryparameters": [
{
"jsondocId": "e2bdd253-0bac-470f-acc9-658c55342535",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "de1966c3-c89b-4c20-8873-3ea2be0ef789",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "5bc57eb8-0678-43f1-9e78-ecafd0d4460e",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "e645074d-2384-4dcd-bd22-724048080e11",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "47164495-f4eb-40f8-bb40-19320331c2cb",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','non_reserved_properties':[{'tag':'clockwork','value':'orange'},{'tag':'color','value':'purple'}]}. Available status found here: /availableStatus/ ",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/addAttribute",
"produces": ["application/json"],
"methodName": "addAttribute"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "173986b2-1915-4364-be19-9ee6785df5bb",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "39c008dd-a2e1-4f03-a8af-8c63027810be",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "5b1ac92d-0269-43ec-b345-fc96df1edfab",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Returns a translation table as JSON",
"queryparameters": [],
"path": "/annotationEditor/getTranslationTable",
"produces": ["application/json"],
"methodName": "getTranslationTable"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "d3e587e5-f423-4b15-8af1-a23275c934d4",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "b4fa2163-f6a1-468a-905a-168752a0aa46",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "b7dfa738-cd5a-4ce6-bfe4-d6543910f2b4",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Add non-coding genomic feature",
"queryparameters": [
{
"jsondocId": "28acac55-5d37-43a6-9936-f3081719639b",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "5c4d3fd2-6931-4cd6-8be3-0256bb4c6d3f",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "0366e1c6-ad61-41f2-a7f6-da569eeae864",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "0970e7fe-60c6-49b0-84eb-fb6813fee8a6",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "44bc52c5-7487-4d3a-adcf-5c9de517fb04",
"description": "Suppress the history of this operation",
"name": "suppressHistory",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "boolean"
},
{
"jsondocId": "bc08cd68-b427-49eb-b8a0-f09e8f097989",
"description": "Suppress instant update of the user interface",
"name": "suppressEvents",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "boolean"
},
{
"jsondocId": "f11a4616-7bab-448d-a9c7-2b6466bbf348",
"description": "JSONArray of JSON feature objects described by https://github.com/GMOD/Apollo/blob/master/grails-app/domain/org/bbop/apollo/Feature.groovy",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/addFeature",
"produces": ["application/json"],
"methodName": "addFeature"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "37da9ba9-f77a-4532-8b9d-8198543ab251",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "f43b8962-a0f3-4452-a1ff-cc3bc5240dbd",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "86c65b5e-7e8b-4d14-90ad-a165df467dc4",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Set exon feature boundaries",
"queryparameters": [
{
"jsondocId": "893e76ae-7193-4a96-99d1-461a7249d4cf",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "3b50243d-6874-40cb-baa6-706c97249c55",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "b2780b3b-c1d7-4910-b020-31547262d779",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "46574141-11e1-4221-98da-5cac31578675",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "414d3a8b-0f0d-40ec-912d-40db3360bd11",
"description": "Suppress the history of this operation",
"name": "suppressHistory",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "boolean"
},
{
"jsondocId": "b38d0074-7a03-4557-ac49-97c08875a57b",
"description": "Suppress instant update of the user interface",
"name": "suppressEvents",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "boolean"
},
{
"jsondocId": "ea66d101-9548-4075-9f72-adfb57351be5",
"description": "JSONArray of JSON feature objects described by https://github.com/GMOD/Apollo/blob/master/grails-app/domain/org/bbop/apollo/Feature.groovy",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/setExonBoundaries",
"produces": ["application/json"],
"methodName": "setExonBoundaries"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "81b25bc3-8060-41c2-a85f-13fe89cca74d",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "4563296a-b397-428c-bcd5-6497c81b1f9f",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "dd48864d-bb86-4b1a-8f7a-dbf870dbecaa",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Add an exon",
"queryparameters": [
{
"jsondocId": "46d8b071-be6d-4330-92bf-bbd6e9f4c38e",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "ec3648e6-a18d-4735-9f7f-8858ced42d58",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "0ae3a5ef-61ff-4c88-a354-a9e537dc5389",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
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