From 7206264772b700fa7657c1bd558daf2124db98c2 Mon Sep 17 00:00:00 2001 From: jonca79 <54137490+jonca79@users.noreply.github.com> Date: Mon, 23 Sep 2024 14:27:46 +0200 Subject: [PATCH] feat: update ENC hotspot file --- config/config_production_pipeline.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/config/config_production_pipeline.yaml b/config/config_production_pipeline.yaml index cb3b257..0942936 100644 --- a/config/config_production_pipeline.yaml +++ b/config/config_production_pipeline.yaml @@ -113,7 +113,7 @@ hotspot_report: chr_translation_file: "config/reports/hotspot_report.chr.translation.hg19" hotspot_mutations: all: "/projects/wp1/nobackup/ngs/utveckling/Twist_DNA_DATA/bed/Hotspots_combined_regions_nodups.231011.csv" - ENC: "/projects/wp1/nobackup/ngs/utveckling/Twist_DNA_DATA/bed/ENC_hotspots_240604.csv" + ENC: "/projects/wp1/nobackup/ngs/utveckling/Twist_DNA_DATA/bed/ENC_hotspots_240919.csv" manta_config_t: extra: "--exome --callRegions /projects/wp1/nobackup/ngs/utveckling/Twist_DNA_DATA/bed/pool1_pool2.sort.merged.padded20.cnv200.hg19.split_fusion_genes.210608.bed.gz"