From 14e4330bc203a1b4ec196c23ce612b9877e99ec0 Mon Sep 17 00:00:00 2001
From: Kevin Velghe <kevin.velghe@ugent.be>
Date: Thu, 29 Aug 2024 19:06:53 +0200
Subject: [PATCH] update documentation to run ms2pip correlate

---
 docs/source/usage.rst | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/source/usage.rst b/docs/source/usage.rst
index aca0d15..ac97c38 100644
--- a/docs/source/usage.rst
+++ b/docs/source/usage.rst
@@ -65,7 +65,7 @@ For instance:
 
 .. code-block:: sh
 
-    ms2pip correlate results.sage.tsv --spectrum-file spectra.mgf
+    ms2pip correlate --psm-filetype sage results.sage.tsv spectra.mgf
 
 
 ``get-training-data``