_pkgdown.yml

url: https://duke-malaria-collaboratory.github.io/bistro/
template:
  bootstrap: 5

reference:
- title: bistro matching function
  desc: >
    Uses the bistro algorithm to identify matches between bloodmeals and people
  contents:
  - bistro

- title: Built-in datasets
  contents:
  - bloodmeal_profiles
  - human_profiles
  - pop_allele_freqs

- title: Other matching functions
  contents:
  - match_exact
  - match_similarity
  - match_static_thresh

- title: Create a human database from bloodmeal profiles
  desc: >
    Create a human database from single-source bloodmeals with complete STR profiles
  contents:
  - create_db_from_bloodmeals

- title: Other functions
  desc: >
    Sub-functions used by `bistro()`
  contents:
  - calc_allele_freqs
  - prep_bloodmeal_profiles
  - prep_human_profiles
  - rm_dups
  - rm_twins
  - filter_peaks
  - calc_log10_lrs
  - identify_matches