_Utilities
_Parameters
_{Experiment ━━ Genus ━━ Species ━━ Organism ━━ Genotype ━━ Chromosome ━━ Node}
^{┗━━━━ Phenotype} ^{┗━━━━━ Link}

Organism

An Organism corresponds to an individual agent whose behavior is encoded by its Genotype, and expressed by its Phenotype.

Properties

Species* species

Points to the Species to which the Organism belongs.

taxon_group group

Specifies whether the Organism belongs to the DOMINANT or CONTESTANT group within its Species.

Genotype* genotype

Points to the Organism's Genotype.

Phenotype* phenotype

Points to the Organism's Phenotype.

unsigned int age

The Organism's age measured in generational cycles.

double score

The Organism's fitness score.

Organism(Species* species_, Graph graph_)

Constructs an Organism from a minimal input graph_, associating it to the referenced input Species.

Organism(Organism* organism_)

Constructs a deep copy of the referenced input Organism, associating it to the same Species.

Organism(Graph graph_)

Constructs a replica of an Organism whose Genotype is encoded by the input graph_.

~Organism()

Destructs the Organism, as well as its Genotype and Phenotype.

Organism* mutate()

Produces an offspring Organism through MUTATION.

Organism* assimilate(Organism* organism_)

Produces an offspring Organism through ASSIMILATION.

std::vector<std::vector<std::vector<double>>> react()

Prompts the Organism to react to its Experiment's stimuli.

std::vector<std::vector<std::vector<double>>> react(std::vector<std::vector<std::vector<double>>> stimuli_)

Prompts the Organism to react to the input stimuli_.

Graph graph() const

Generates a Graph encapsulating the Organism's Genotype properties.