diff --git a/env/common/templates/galaxy/config/tpv/tools.yaml.j2 b/env/common/templates/galaxy/config/tpv/tools.yaml.j2 index da3155da..c913b8a3 100644 --- a/env/common/templates/galaxy/config/tpv/tools.yaml.j2 +++ b/env/common/templates/galaxy/config/tpv/tools.yaml.j2 @@ -1274,11 +1274,15 @@ tools: # local test tools toolshed.g2.bx.psu.edu/repos/iuc/ncbi_fcs_gx/ncbi_fcs_gx/.*: + env: + - name: TMPDIR + value: /dev/shm scheduling: require: - resize-shm - jetstream2 - pulsar + ncbi_fcs_gx: inherits: toolshed.g2.bx.psu.edu/repos/iuc/ncbi_fcs_gx/ncbi_fcs_gx/.* diff --git a/env/common/templates/galaxy/config/tpv/tools_vgp.yaml.j2 b/env/common/templates/galaxy/config/tpv/tools_vgp.yaml.j2 index d04579ef..191029f0 100644 --- a/env/common/templates/galaxy/config/tpv/tools_vgp.yaml.j2 +++ b/env/common/templates/galaxy/config/tpv/tools_vgp.yaml.j2 @@ -518,6 +518,9 @@ tools: - pulsar toolshed.g2.bx.psu.edu/repos/iuc/ncbi_fcs_gx/ncbi_fcs_gx/.*: + env: + - name: TMPDIR + value: /dev/shm scheduling: require: - resize-shm