diff --git a/config/config.data.hg38.yaml b/config/config.data.hg38.yaml index ea8cb67f..171bcb10 100644 --- a/config/config.data.hg38.yaml +++ b/config/config.data.hg38.yaml @@ -61,7 +61,7 @@ call_small_cnv_amplifications: regions_file: "{{PROJECT_DESIGN_DATA}}/GMS560/cnv/cnv_amplification_genes_hg38_240307.tsv" cnvkit_batch: - normal_reference: "{{PROJECT_PON_DATA}}/GMS560/PoN/cnvkit_nextseq_noUmea_27_hg38.cnn" + normal_reference: "{{PROJECT_PON_DATA}}/GMS560/PoN/cnvkit_PoN_combined_hg38.cnn" cnvkit_batch_hrd: normal_reference_hrd: "{{PROJECT_PON_DATA}}/GMS560/PoN/cnvkit_nextseq_noUmea_27_hg38.cnn"