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&& tabix -p bed $$(basename$<)|& tee -a $(INSTALL_LOG)
The Makefile for use with make install as directed by the documentation is assuming both bgzip and tabix are available on the system level.
Attempted fix by using the previously built samtools container but it does not seem to include the htslib package.
Temporarily fixed by creating container using htslib from dockerhub and using it in Makefile.
The text was updated successfully, but these errors were encountered:
jasen/Makefile
Line 803 in 999b2bd
jasen/Makefile
Line 810 in 999b2bd
The
Makefile
for use withmake install
as directed by the documentation is assuming bothbgzip
andtabix
are available on the system level.Attempted fix by using the previously built
samtools
container but it does not seem to include thehtslib
package.Temporarily fixed by creating container using htslib from dockerhub and using it in
Makefile
.The text was updated successfully, but these errors were encountered: