From 068f0fbca6822b83f77c0672a9b3ac55274d1808 Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 16 Oct 2023 08:05:18 +0000 Subject: [PATCH] update dependencies for ubuntu-latest/py3.9 --- requirements/ubuntu-latest_py3.9.txt | 76 +++++-------- requirements/ubuntu-latest_py3.9_extras.txt | 112 ++++++++------------ 2 files changed, 66 insertions(+), 122 deletions(-) diff --git a/requirements/ubuntu-latest_py3.9.txt b/requirements/ubuntu-latest_py3.9.txt index 5646e2626..637870aa3 100644 --- a/requirements/ubuntu-latest_py3.9.txt +++ b/requirements/ubuntu-latest_py3.9.txt @@ -6,17 +6,15 @@ # certifi==2023.7.22 # via requests -charset-normalizer==3.2.0 +charset-normalizer==3.3.0 # via requests -contourpy==1.1.0 +contourpy==1.1.1 # via matplotlib -cycler==0.11.0 +cycler==0.12.1 # via matplotlib dnspython==2.4.2 # via pymongo -emmet-core==0.67.5 - # via mp-api -fonttools==4.42.1 +fonttools==4.43.1 # via matplotlib future==0.18.3 # via @@ -24,7 +22,7 @@ future==0.18.3 # uncertainties idna==3.4 # via requests -importlib-resources==6.0.1 +importlib-resources==6.1.0 # via matplotlib joblib==1.3.2 # via @@ -34,23 +32,17 @@ kiwisolver==1.4.5 # via matplotlib latexcodec==2.0.1 # via pybtex -matplotlib==3.7.2 +matplotlib==3.8.0 # via pymatgen -monty==2023.9.5 +monty==2023.9.25 # via - # emmet-core # matminer (setup.py) - # mp-api # pymatgen -mp-api==0.35.1 - # via pymatgen mpmath==1.3.0 # via sympy -msgpack==1.0.5 - # via mp-api networkx==3.1 # via pymatgen -numpy==1.25.2 +numpy==1.26.1 # via # contourpy # matminer (setup.py) @@ -60,36 +52,27 @@ numpy==1.25.2 # scikit-learn # scipy # spglib -packaging==23.1 +packaging==23.2 # via # matplotlib # plotly palettable==3.3.3 # via pymatgen -pandas==2.1.0 +pandas==2.1.1 # via # matminer (setup.py) # pymatgen -pillow==10.0.0 +pillow==10.1.0 # via matplotlib -plotly==5.16.1 +plotly==5.17.0 # via pymatgen pybtex==0.24.0 - # via - # emmet-core - # pymatgen -pydantic==1.10.12 - # via - # emmet-core - # pymatgen -pymatgen==2023.9.2 - # via - # emmet-core - # matminer (setup.py) - # mp-api + # via pymatgen +pymatgen==2023.10.11 + # via matminer (setup.py) pymongo==4.5.0 # via matminer (setup.py) -pyparsing==3.0.9 +pyparsing==3.1.1 # via matplotlib python-dateutil==2.8.2 # via @@ -102,15 +85,14 @@ pyyaml==6.0.1 requests==2.31.0 # via # matminer (setup.py) - # mp-api # pymatgen -ruamel-yaml==0.17.32 +ruamel-yaml==0.17.35 # via pymatgen -ruamel-yaml-clib==0.2.7 +ruamel-yaml-clib==0.2.8 # via ruamel-yaml -scikit-learn==1.3.0 +scikit-learn==1.3.1 # via matminer (setup.py) -scipy==1.11.2 +scipy==1.11.3 # via # pymatgen # scikit-learn @@ -119,10 +101,8 @@ six==1.16.0 # latexcodec # pybtex # python-dateutil -spglib==2.0.2 - # via - # emmet-core - # pymatgen +spglib==2.1.0 + # via pymatgen sympy==1.12 # via # matminer (setup.py) @@ -137,19 +117,11 @@ tqdm==4.66.1 # via # matminer (setup.py) # pymatgen -typing-extensions==4.7.1 - # via - # emmet-core - # mp-api - # pydantic tzdata==2023.3 # via pandas uncertainties==3.1.7 # via pymatgen -urllib3==2.0.4 +urllib3==2.0.6 # via requests -zipp==3.16.2 +zipp==3.17.0 # via importlib-resources - -# The following packages are considered to be unsafe in a requirements file: -# setuptools diff --git a/requirements/ubuntu-latest_py3.9_extras.txt b/requirements/ubuntu-latest_py3.9_extras.txt index 8b2e7c594..5873e58af 100644 --- a/requirements/ubuntu-latest_py3.9_extras.txt +++ b/requirements/ubuntu-latest_py3.9_extras.txt @@ -13,29 +13,29 @@ ase==3.22.1 # aflow # dscribe # matminer (setup.py) -astroid==2.15.6 +astroid==3.0.1 # via pylint attrs==23.1.0 # via # jsonschema # referencing -babel==2.12.1 +babel==2.13.0 # via sphinx beautifulsoup4==4.12.2 # via aflow -black==23.7.0 +black==23.9.1 # via matminer (setup.py) certifi==2023.7.22 # via requests -cffi==1.15.1 +cffi==1.16.0 # via cryptography -charset-normalizer==3.2.0 +charset-normalizer==3.3.0 # via requests citrination-client==6.5.1 # via matminer (setup.py) click==8.1.7 # via black -contourpy==1.1.0 +contourpy==1.1.1 # via matplotlib coverage[toml]==6.5.0 # via @@ -44,11 +44,11 @@ coverage[toml]==6.5.0 # pytest-cov coveralls==3.3.1 # via matminer (setup.py) -cryptography==41.0.3 +cryptography==41.0.4 # via # globus-sdk # pyjwt -cycler==0.11.0 +cycler==0.12.1 # via matplotlib dill==0.3.7 # via pylint @@ -60,15 +60,13 @@ docutils==0.20.1 # via sphinx dscribe==2.1.0 # via matminer (setup.py) -emmet-core==0.67.5 - # via mp-api exceptiongroup==1.1.3 # via pytest fair-research-login==0.3.1 # via mdf-toolbox flake8==6.1.0 # via matminer (setup.py) -fonttools==4.42.1 +fonttools==4.43.1 # via matplotlib future==0.18.3 # via @@ -76,7 +74,7 @@ future==0.18.3 # uncertainties globus-nexus-client==0.4.1 # via mdf-toolbox -globus-sdk==3.28.0 +globus-sdk==3.29.0 # via # fair-research-login # globus-nexus-client @@ -90,7 +88,7 @@ imagesize==1.4.1 # via sphinx importlib-metadata==6.8.0 # via sphinx -importlib-resources==6.0.1 +importlib-resources==6.1.0 # via matplotlib iniconfig==2.0.0 # via pytest @@ -115,13 +113,11 @@ kiwisolver==1.4.5 # via matplotlib latexcodec==2.0.1 # via pybtex -lazy-object-proxy==1.9.0 - # via astroid -llvmlite==0.40.1 +llvmlite==0.41.0 # via numba markupsafe==2.1.3 # via jinja2 -matplotlib==3.7.2 +matplotlib==3.8.0 # via # ase # pymatgen @@ -133,25 +129,19 @@ mdf-forge==0.8.0 # via matminer (setup.py) mdf-toolbox==0.6.0 # via mdf-forge -monty==2023.9.5 +monty==2023.9.25 # via - # emmet-core # matminer (setup.py) - # mp-api # pymatgen -mp-api==0.35.1 - # via pymatgen mpmath==1.3.0 # via sympy -msgpack==1.0.5 - # via mp-api mypy-extensions==1.0.0 # via black networkx==3.1 # via pymatgen -numba==0.57.1 +numba==0.58.0 # via sparse -numpy==1.24.4 +numpy==1.25.2 # via # aflow # ase @@ -167,7 +157,7 @@ numpy==1.24.4 # scipy # sparse # spglib -packaging==23.1 +packaging==23.2 # via # black # matplotlib @@ -176,52 +166,45 @@ packaging==23.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.1.0 +pandas==2.1.1 # via # matminer (setup.py) # pymatgen pathspec==0.11.2 # via black -pillow==10.0.0 +pillow==10.1.0 # via matplotlib -platformdirs==3.10.0 +platformdirs==3.11.0 # via # black # pylint -plotly==5.16.1 +plotly==5.17.0 # via pymatgen pluggy==1.3.0 # via pytest pybind11==2.11.1 # via dscribe pybtex==0.24.0 - # via - # emmet-core - # pymatgen -pycodestyle==2.11.0 + # via pymatgen +pycodestyle==2.11.1 # via flake8 pycparser==2.21 # via cffi -pydantic==1.10.12 - # via - # emmet-core - # pymatgen pyflakes==3.1.0 # via flake8 pygments==2.16.1 # via sphinx pyjwt[crypto]==2.8.0 - # via globus-sdk -pylint==2.17.5 - # via matminer (setup.py) -pymatgen==2023.9.2 # via - # emmet-core - # matminer (setup.py) - # mp-api + # globus-sdk + # pyjwt +pylint==3.0.1 + # via matminer (setup.py) +pymatgen==2023.10.11 + # via matminer (setup.py) pymongo==4.5.0 # via matminer (setup.py) -pyparsing==3.0.9 +pyparsing==3.1.1 # via # httplib2 # matplotlib @@ -229,14 +212,14 @@ pypif==2.1.2 # via citrination-client pyrsistent==0.19.3 # via jsonschema -pytest==7.4.1 +pytest==7.4.2 # via # matminer (setup.py) # pytest-cov # pytest-timeout pytest-cov==4.1.0 # via matminer (setup.py) -pytest-timeout==2.1.0 +pytest-timeout==2.2.0 # via matminer (setup.py) python-dateutil==2.8.2 # via @@ -256,18 +239,17 @@ requests==2.31.0 # matminer (setup.py) # mdf-forge # mdf-toolbox - # mp-api # pymatgen # sphinx -ruamel-yaml==0.17.32 +ruamel-yaml==0.17.35 # via pymatgen -ruamel-yaml-clib==0.2.7 +ruamel-yaml-clib==0.2.8 # via ruamel-yaml -scikit-learn==1.3.0 +scikit-learn==1.3.1 # via # dscribe # matminer (setup.py) -scipy==1.11.2 +scipy==1.11.3 # via # ase # dscribe @@ -288,11 +270,9 @@ soupsieve==2.5 # via beautifulsoup4 sparse==0.14.0 # via dscribe -spglib==2.0.2 - # via - # emmet-core - # pymatgen -sphinx==7.2.5 +spglib==2.1.0 + # via pymatgen +sphinx==7.2.6 # via # matminer (setup.py) # sphinxcontrib-applehelp @@ -337,14 +317,11 @@ tqdm==4.66.1 # matminer (setup.py) # mdf-forge # pymatgen -typing-extensions==4.7.1 +typing-extensions==4.8.0 # via # astroid # black - # emmet-core # globus-sdk - # mp-api - # pydantic # pylint tzdata==2023.3 # via pandas @@ -352,14 +329,9 @@ ujson==5.8.0 # via matminer (setup.py) uncertainties==3.1.7 # via pymatgen -urllib3==2.0.4 +urllib3==2.0.6 # via requests -wrapt==1.15.0 - # via astroid -zipp==3.16.2 +zipp==3.17.0 # via # importlib-metadata # importlib-resources - -# The following packages are considered to be unsafe in a requirements file: -# setuptools