diff --git a/requirements/ubuntu-latest_py3.9.txt b/requirements/ubuntu-latest_py3.9.txt index 5646e2626..e29a4caab 100644 --- a/requirements/ubuntu-latest_py3.9.txt +++ b/requirements/ubuntu-latest_py3.9.txt @@ -4,27 +4,25 @@ # # pip-compile --output-file=requirements/ubuntu-latest_py3.9.txt # -certifi==2023.7.22 +certifi==2023.11.17 # via requests -charset-normalizer==3.2.0 +charset-normalizer==3.3.2 # via requests -contourpy==1.1.0 +contourpy==1.2.0 # via matplotlib -cycler==0.11.0 +cycler==0.12.1 # via matplotlib -dnspython==2.4.2 +dnspython==2.5.0 # via pymongo -emmet-core==0.67.5 - # via mp-api -fonttools==4.42.1 +fonttools==4.47.2 # via matplotlib future==0.18.3 # via # matminer (setup.py) # uncertainties -idna==3.4 +idna==3.6 # via requests -importlib-resources==6.0.1 +importlib-resources==6.1.1 # via matplotlib joblib==1.3.2 # via @@ -34,23 +32,17 @@ kiwisolver==1.4.5 # via matplotlib latexcodec==2.0.1 # via pybtex -matplotlib==3.7.2 +matplotlib==3.8.2 # via pymatgen -monty==2023.9.5 +monty==2023.11.3 # via - # emmet-core # matminer (setup.py) - # mp-api # pymatgen -mp-api==0.35.1 - # via pymatgen mpmath==1.3.0 # via sympy -msgpack==1.0.5 - # via mp-api -networkx==3.1 +networkx==3.2.1 # via pymatgen -numpy==1.25.2 +numpy==1.26.3 # via # contourpy # matminer (setup.py) @@ -60,36 +52,27 @@ numpy==1.25.2 # scikit-learn # scipy # spglib -packaging==23.1 +packaging==23.2 # via # matplotlib # plotly palettable==3.3.3 # via pymatgen -pandas==2.1.0 +pandas==2.2.0 # via # matminer (setup.py) # pymatgen -pillow==10.0.0 +pillow==10.2.0 # via matplotlib -plotly==5.16.1 +plotly==5.18.0 # via pymatgen pybtex==0.24.0 - # via - # emmet-core - # pymatgen -pydantic==1.10.12 - # via - # emmet-core - # pymatgen -pymatgen==2023.9.2 - # via - # emmet-core - # matminer (setup.py) - # mp-api -pymongo==4.5.0 + # via pymatgen +pymatgen==2023.12.18 + # via matminer (setup.py) +pymongo==4.6.1 # via matminer (setup.py) -pyparsing==3.0.9 +pyparsing==3.1.1 # via matplotlib python-dateutil==2.8.2 # via @@ -102,15 +85,14 @@ pyyaml==6.0.1 requests==2.31.0 # via # matminer (setup.py) - # mp-api # pymatgen -ruamel-yaml==0.17.32 +ruamel-yaml==0.18.5 # via pymatgen -ruamel-yaml-clib==0.2.7 +ruamel-yaml-clib==0.2.8 # via ruamel-yaml -scikit-learn==1.3.0 +scikit-learn==1.4.0 # via matminer (setup.py) -scipy==1.11.2 +scipy==1.12.0 # via # pymatgen # scikit-learn @@ -119,10 +101,8 @@ six==1.16.0 # latexcodec # pybtex # python-dateutil -spglib==2.0.2 - # via - # emmet-core - # pymatgen +spglib==2.2.0 + # via pymatgen sympy==1.12 # via # matminer (setup.py) @@ -137,19 +117,11 @@ tqdm==4.66.1 # via # matminer (setup.py) # pymatgen -typing-extensions==4.7.1 - # via - # emmet-core - # mp-api - # pydantic -tzdata==2023.3 +tzdata==2023.4 # via pandas uncertainties==3.1.7 # via pymatgen -urllib3==2.0.4 +urllib3==2.1.0 # via requests -zipp==3.16.2 +zipp==3.17.0 # via importlib-resources - -# The following packages are considered to be unsafe in a requirements file: -# setuptools diff --git a/requirements/ubuntu-latest_py3.9_extras.txt b/requirements/ubuntu-latest_py3.9_extras.txt index 8b2e7c594..2d04f27cd 100644 --- a/requirements/ubuntu-latest_py3.9_extras.txt +++ b/requirements/ubuntu-latest_py3.9_extras.txt @@ -6,36 +6,36 @@ # aflow==0.0.11 # via matminer (setup.py) -alabaster==0.7.13 +alabaster==0.7.16 # via sphinx ase==3.22.1 # via # aflow # dscribe # matminer (setup.py) -astroid==2.15.6 +astroid==3.0.2 # via pylint -attrs==23.1.0 +attrs==23.2.0 # via # jsonschema # referencing -babel==2.12.1 +babel==2.14.0 # via sphinx -beautifulsoup4==4.12.2 +beautifulsoup4==4.12.3 # via aflow -black==23.7.0 +black==23.12.1 # via matminer (setup.py) -certifi==2023.7.22 +certifi==2023.11.17 # via requests -cffi==1.15.1 +cffi==1.16.0 # via cryptography -charset-normalizer==3.2.0 +charset-normalizer==3.3.2 # via requests citrination-client==6.5.1 # via matminer (setup.py) click==8.1.7 # via black -contourpy==1.1.0 +contourpy==1.2.0 # via matplotlib coverage[toml]==6.5.0 # via @@ -44,15 +44,15 @@ coverage[toml]==6.5.0 # pytest-cov coveralls==3.3.1 # via matminer (setup.py) -cryptography==41.0.3 +cryptography==41.0.7 # via # globus-sdk # pyjwt -cycler==0.11.0 +cycler==0.12.1 # via matplotlib dill==0.3.7 # via pylint -dnspython==2.4.2 +dnspython==2.5.0 # via pymongo docopt==0.6.2 # via coveralls @@ -60,15 +60,13 @@ docutils==0.20.1 # via sphinx dscribe==2.1.0 # via matminer (setup.py) -emmet-core==0.67.5 - # via mp-api -exceptiongroup==1.1.3 +exceptiongroup==1.2.0 # via pytest fair-research-login==0.3.1 # via mdf-toolbox -flake8==6.1.0 +flake8==7.0.0 # via matminer (setup.py) -fonttools==4.42.1 +fonttools==4.47.2 # via matplotlib future==0.18.3 # via @@ -76,7 +74,7 @@ future==0.18.3 # uncertainties globus-nexus-client==0.4.1 # via mdf-toolbox -globus-sdk==3.28.0 +globus-sdk==3.34.0 # via # fair-research-login # globus-nexus-client @@ -84,19 +82,19 @@ globus-sdk==3.28.0 # mdf-toolbox httplib2==0.22.0 # via matminer (setup.py) -idna==3.4 +idna==3.6 # via requests imagesize==1.4.1 # via sphinx -importlib-metadata==6.8.0 +importlib-metadata==7.0.1 # via sphinx -importlib-resources==6.0.1 +importlib-resources==6.1.1 # via matplotlib iniconfig==2.0.0 # via pytest -isort==5.12.0 +isort==5.13.2 # via pylint -jinja2==3.1.2 +jinja2==3.1.3 # via # aflow # sphinx @@ -115,13 +113,11 @@ kiwisolver==1.4.5 # via matplotlib latexcodec==2.0.1 # via pybtex -lazy-object-proxy==1.9.0 - # via astroid -llvmlite==0.40.1 +llvmlite==0.41.1 # via numba -markupsafe==2.1.3 +markupsafe==2.1.4 # via jinja2 -matplotlib==3.7.2 +matplotlib==3.8.2 # via # ase # pymatgen @@ -133,25 +129,19 @@ mdf-forge==0.8.0 # via matminer (setup.py) mdf-toolbox==0.6.0 # via mdf-forge -monty==2023.9.5 +monty==2023.11.3 # via - # emmet-core # matminer (setup.py) - # mp-api # pymatgen -mp-api==0.35.1 - # via pymatgen mpmath==1.3.0 # via sympy -msgpack==1.0.5 - # via mp-api mypy-extensions==1.0.0 # via black -networkx==3.1 +networkx==3.2.1 # via pymatgen -numba==0.57.1 +numba==0.58.1 # via sparse -numpy==1.24.4 +numpy==1.26.3 # via # aflow # ase @@ -167,7 +157,7 @@ numpy==1.24.4 # scipy # sparse # spglib -packaging==23.1 +packaging==23.2 # via # black # matplotlib @@ -176,67 +166,60 @@ packaging==23.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.1.0 +pandas==2.2.0 # via # matminer (setup.py) # pymatgen -pathspec==0.11.2 +pathspec==0.12.1 # via black -pillow==10.0.0 +pillow==10.2.0 # via matplotlib -platformdirs==3.10.0 +platformdirs==4.1.0 # via # black # pylint -plotly==5.16.1 +plotly==5.18.0 # via pymatgen pluggy==1.3.0 # via pytest pybind11==2.11.1 # via dscribe pybtex==0.24.0 - # via - # emmet-core - # pymatgen -pycodestyle==2.11.0 + # via pymatgen +pycodestyle==2.11.1 # via flake8 pycparser==2.21 # via cffi -pydantic==1.10.12 - # via - # emmet-core - # pymatgen -pyflakes==3.1.0 +pyflakes==3.2.0 # via flake8 -pygments==2.16.1 +pygments==2.17.2 # via sphinx pyjwt[crypto]==2.8.0 - # via globus-sdk -pylint==2.17.5 - # via matminer (setup.py) -pymatgen==2023.9.2 # via - # emmet-core - # matminer (setup.py) - # mp-api -pymongo==4.5.0 + # globus-sdk + # pyjwt +pylint==3.0.3 + # via matminer (setup.py) +pymatgen==2023.12.18 + # via matminer (setup.py) +pymongo==4.6.1 # via matminer (setup.py) -pyparsing==3.0.9 +pyparsing==3.1.1 # via # httplib2 # matplotlib pypif==2.1.2 # via citrination-client -pyrsistent==0.19.3 +pyrsistent==0.20.0 # via jsonschema -pytest==7.4.1 +pytest==7.4.4 # via # matminer (setup.py) # pytest-cov # pytest-timeout pytest-cov==4.1.0 # via matminer (setup.py) -pytest-timeout==2.1.0 +pytest-timeout==2.2.0 # via matminer (setup.py) python-dateutil==2.8.2 # via @@ -256,18 +239,17 @@ requests==2.31.0 # matminer (setup.py) # mdf-forge # mdf-toolbox - # mp-api # pymatgen # sphinx -ruamel-yaml==0.17.32 +ruamel-yaml==0.18.5 # via pymatgen -ruamel-yaml-clib==0.2.7 +ruamel-yaml-clib==0.2.8 # via ruamel-yaml -scikit-learn==1.3.0 +scikit-learn==1.4.0 # via # dscribe # matminer (setup.py) -scipy==1.11.2 +scipy==1.12.0 # via # ase # dscribe @@ -286,31 +268,23 @@ snowballstemmer==2.2.0 # via sphinx soupsieve==2.5 # via beautifulsoup4 -sparse==0.14.0 +sparse==0.15.1 # via dscribe -spglib==2.0.2 - # via - # emmet-core - # pymatgen -sphinx==7.2.5 - # via - # matminer (setup.py) - # sphinxcontrib-applehelp - # sphinxcontrib-devhelp - # sphinxcontrib-htmlhelp - # sphinxcontrib-qthelp - # sphinxcontrib-serializinghtml -sphinxcontrib-applehelp==1.0.7 +spglib==2.2.0 + # via pymatgen +sphinx==7.2.6 + # via matminer (setup.py) +sphinxcontrib-applehelp==1.0.8 # via sphinx -sphinxcontrib-devhelp==1.0.5 +sphinxcontrib-devhelp==1.0.6 # via sphinx -sphinxcontrib-htmlhelp==2.0.4 +sphinxcontrib-htmlhelp==2.0.5 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.6 +sphinxcontrib-qthelp==1.0.7 # via sphinx -sphinxcontrib-serializinghtml==1.1.9 +sphinxcontrib-serializinghtml==1.1.10 # via sphinx sympy==1.12 # via @@ -320,7 +294,7 @@ tabulate==0.9.0 # via pymatgen tenacity==8.2.3 # via plotly -termcolor==2.3.0 +termcolor==2.4.0 # via aflow threadpoolctl==3.2.0 # via scikit-learn @@ -330,36 +304,28 @@ tomli==2.0.1 # coverage # pylint # pytest -tomlkit==0.12.1 +tomlkit==0.12.3 # via pylint tqdm==4.66.1 # via # matminer (setup.py) # mdf-forge # pymatgen -typing-extensions==4.7.1 +typing-extensions==4.9.0 # via # astroid # black - # emmet-core # globus-sdk - # mp-api - # pydantic # pylint -tzdata==2023.3 +tzdata==2023.4 # via pandas -ujson==5.8.0 +ujson==5.9.0 # via matminer (setup.py) uncertainties==3.1.7 # via pymatgen -urllib3==2.0.4 +urllib3==2.1.0 # via requests -wrapt==1.15.0 - # via astroid -zipp==3.16.2 +zipp==3.17.0 # via # importlib-metadata # importlib-resources - -# The following packages are considered to be unsafe in a requirements file: -# setuptools