diff --git a/datasets/eeg_ds003645s_hed_demo/CHANGES b/datasets/eeg_ds003645s_hed_demo/CHANGES new file mode 100644 index 00000000..c5166eeb --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/CHANGES @@ -0,0 +1,6 @@ +1.0.0 2021-05-11 + - First release +Revision history for Face Recognition experiment by Wakeman-Henson + +version 1.0 - April 2021 + - Initial release of EEG data in this experiment for HED education purposes diff --git a/datasets/eeg_ds003645s_hed_demo/README b/datasets/eeg_ds003645s_hed_demo/README new file mode 100644 index 00000000..7b6d824a --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/README @@ -0,0 +1,21 @@ +## Introduction +This dataset is derived from a number of other datasets, but particularly ds003645 from openNeuro. +The purpose of the dataset is to demonstrate how to use HED in various ways. + +| Topic | Description | +| ----- | ------- | +| [Sidecar] | How to use a sidecar. | + +### Basic use of sidecar + + +### Use of the HED column + +### Use of inheritance + +### Use of curly braces + + +### Use of long form + +### Use in \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/dataset_description.json b/datasets/eeg_ds003645s_hed_demo/dataset_description.json new file mode 100644 index 00000000..00de310a --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/dataset_description.json @@ -0,0 +1,27 @@ +{ + "Name": "Face processing MEEG dataset with HED annotation", + "BIDSVersion": "1.8.0", + "HEDVersion": "8.1.0", + "License": "CC0", + "Authors": [ + "Daniel G. Wakeman", + "Richard N Henson", + "Dung Truong (curation)", + "Kay Robbins (curation)", + "Scott Makeig (curation)", + "Arno Delorme (curation)" + ], + "ReferencesAndLinks": [ + "Wakeman, D., Henson, R. (2015). A multi-subject, multi-modal human neuroimaging dataset. Sci Data 2, 150001. https://doi.org/10.1038/sdata.2015.1", + "Robbins, K., Truong, D., Appelhoff, S., Delorme, A., & Makeig, S. (2021). Capturing the nature of events and event context using Hierarchical Event Descriptors (HED). In press for NeuroImage Special Issue Practice in MEEG. NeuroImage 245 (2021) 118766. Online: https://www.sciencedirect.com/science/article/pii/S1053811921010387.", + "Robbins, K., Truong, D., Jones, A., Callanan, I., & Makeig, S. (2021). Building FAIR functionality: Annotating events in time series data using Hierarchical Event Descriptors (HED). Neuroinformatics Special Issue Building the NeuroCommons. Neuroinformatics https://doi.org/10.1007/s12021-021-09537-4. Online: https://link.springer.com/article/10.1007/s12021-021-09537-4." + ], + "Funding": [ + "Experiment was supported by the UK Medical Research Council (MC_A060_5PR10) and Elekta Ltd.", + "Curation was supported by: NIH R01 EB023297-03, NIH R01 NS047293-l4, NIH R24 MH120037-01, and R01 MH126700-01A1." + ], + "DatasetDOI": "10.18112/openneuro.ds003645.v2.0.2", + "EthicsApprovals": [ + "The study was approved by Cambridge University Psychological Ethics Committee. Written informed consent was obtained from each participant prior to and following each phase of the experiment." + ] +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/participants.json b/datasets/eeg_ds003645s_hed_demo/participants.json new file mode 100644 index 00000000..50e64c99 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/participants.json @@ -0,0 +1,21 @@ +{ + "participant_id": { + "LongName": "Participant identifier", + "Description": "Unique subject identifier" + }, + "sex": { + "Description": "Sex of the subject", + "Levels": { + "M": "male", + "F": "female" + }, + "HED": { + "M": "Male", + "F": "Female" + } + }, + "age": { + "Description": "Age of the subject", + "Units": "years" + } +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/participants.tsv b/datasets/eeg_ds003645s_hed_demo/participants.tsv new file mode 100644 index 00000000..e7fc7d44 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/participants.tsv @@ -0,0 +1,3 @@ +participant_id age sex HED +sub-002 31 M Healthy,Rested,Novice-level +sub-003 25 M Healthy,Drowsy,Expert-level diff --git a/datasets/eeg_ds003645s_hed_demo/stimuli/circle.bmp b/datasets/eeg_ds003645s_hed_demo/stimuli/circle.bmp new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/stimuli/cross.bmp b/datasets/eeg_ds003645s_hed_demo/stimuli/cross.bmp new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/stimuli/f004.bmp b/datasets/eeg_ds003645s_hed_demo/stimuli/f004.bmp new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/stimuli/f006.bmp b/datasets/eeg_ds003645s_hed_demo/stimuli/f006.bmp new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/stimuli/f010.bmp b/datasets/eeg_ds003645s_hed_demo/stimuli/f010.bmp new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/stimuli/f020.bmp 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MISC n/a +EEG065 EEG microV +EEG066 EEG microV +EEG067 EEG microV +EEG068 EEG microV +EEG069 EEG microV +EEG070 EEG microV +EEG071 EEG microV +EEG072 EEG microV +EEG073 EEG microV +EEG074 EEG microV +STI101 n/a n/a diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-1_eeg.json b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-1_eeg.json new file mode 100644 index 00000000..f57fa2c6 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-1_eeg.json @@ -0,0 +1,24 @@ +{ + "TaskName": "FacePerception", + "TaskDescription": "Subjects viewed stimuli on a screen during six, 7.5 minute runs. The stimuli were photographs of either a famous face (known to most of British or a scrambled face, and appeared for a random duration between 800 and 1,000 ms. Subjects were instructed to fixate centrally throughout the experiment. To ensure attention to each stimulus, participants were asked to press one of two keys with either their left or right index finger (assignment counter-balanced across participants). Their key-press was based on how symmetric they regarded each image: pressing one or the other key depending whether they thought the image was 'more' or 'less symmetric' than average.", + "InstitutionAddress": "15 Chaucer Road, Cambridge, UK", + "InstitutionName": "MRC Cognition & Brain Sciences Unit", + "EEGReference": "nose", + "EEGGround": "left collar bone", + "SamplingFrequency": 250, + "PowerLineFrequency": 50, + "SoftwareFilters": { + "LowPassFilter": { + "cutoff": "350 (Hz)" + } + }, + "EEGPlacementScheme": "extended 10-10% system", + "CapManufacturer": "Easycap", + "EEGChannelCount": 70, + "EOGChannelCount": 2, + "RecordingType": "continuous", + "MiscChannelCount": 309, + "RecordingDuration": 491, + "ECGChannelCount": 0, + "EMGChannelCount": 0 +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-1_eeg.set b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-1_eeg.set new file mode 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a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_channels.tsv b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_channels.tsv new file mode 100644 index 00000000..3020ecb7 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_channels.tsv @@ -0,0 +1,382 @@ +name type units +MEG0113 MISC n/a +MEG0112 MISC n/a +MEG0111 MISC n/a +MEG0122 MISC n/a +MEG0123 MISC n/a +MEG0121 MISC n/a +MEG0132 MISC n/a +MEG0133 MISC n/a +MEG0131 MISC n/a +MEG0143 MISC n/a +MEG0142 MISC n/a +MEG0141 MISC n/a +MEG0213 MISC n/a +MEG0212 MISC n/a +MEG0211 MISC n/a +MEG0222 MISC n/a +MEG0223 MISC n/a +MEG0221 MISC n/a +MEG0232 MISC n/a +MEG0233 MISC n/a +MEG0231 MISC n/a +MEG0243 MISC n/a +MEG0242 MISC n/a +MEG0241 MISC n/a +MEG0313 MISC n/a +MEG0312 MISC n/a +MEG0311 MISC n/a +MEG0322 MISC n/a +MEG0323 MISC n/a +MEG0321 MISC n/a +MEG0333 MISC n/a +MEG0332 MISC n/a +MEG0331 MISC n/a +MEG0343 MISC n/a +MEG0342 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+EEG059 EEG microV +EEG060 EEG microV +EEG061 HEOG n/a +EEG062 VEOG n/a +EEG063 MISC n/a +EEG064 MISC n/a +EEG065 EEG microV +EEG066 EEG microV +EEG067 EEG microV +EEG068 EEG microV +EEG069 EEG microV +EEG070 EEG microV +EEG071 EEG microV +EEG072 EEG microV +EEG073 EEG microV +EEG074 EEG microV +STI101 n/a n/a diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_eeg.json b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_eeg.json new file mode 100644 index 00000000..31deb23d --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_eeg.json @@ -0,0 +1,24 @@ +{ + "TaskName": "FacePerception", + "TaskDescription": "Subjects viewed stimuli on a screen during six, 7.5 minute runs. The stimuli were photographs of either a famous face (known to most of British or a scrambled face, and appeared for a random duration between 800 and 1,000 ms. Subjects were instructed to fixate centrally throughout the experiment. To ensure attention to each stimulus, participants were asked to press one of two keys with either their left or right index finger (assignment counter-balanced across participants). Their key-press was based on how symmetric they regarded each image: pressing one or the other key depending whether they thought the image was 'more' or 'less symmetric' than average.", + "InstitutionAddress": "15 Chaucer Road, Cambridge, UK", + "InstitutionName": "MRC Cognition & Brain Sciences Unit", + "EEGReference": "nose", + "EEGGround": "left collar bone", + "SamplingFrequency": 250, + "PowerLineFrequency": 50, + "SoftwareFilters": { + "LowPassFilter": { + "cutoff": "350 (Hz)" + } + }, + "EEGPlacementScheme": "extended 10-10% system", + "CapManufacturer": "Easycap", + "EEGChannelCount": 70, + "EOGChannelCount": 2, + "RecordingType": "continuous", + "MiscChannelCount": 309, + "RecordingDuration": 497, + "ECGChannelCount": 0, + "EMGChannelCount": 0 +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_eeg.set b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_eeg.set new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv new file mode 100644 index 00000000..2bfd51dc --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv @@ -0,0 +1,200 @@ +onset duration sample event_type face_type rep_status trial rep_lag value stim_file +25.696181818200003 n/a 6424.0455 show_face_initial scrambled_face first_show 1 n/a 17 s096.bmp +26.5616363636 n/a 6640.4091 show_circle n/a n/a 1 n/a 0 circle.bmp +28.2616363636 n/a 7065.4091 show_cross n/a n/a 2 n/a 1 cross.bmp +28.8870909091 n/a 7221.7727 show_face famous_face first_show 2 n/a 5 f148.bmp +29.771636363600003 n/a 7442.9091 right_press n/a n/a 2 n/a 4096 n/a +29.9052727273 n/a 7476.3182 show_circle n/a n/a 2 n/a 0 circle.bmp +31.6052727273 n/a 7901.3182 show_cross n/a n/a 3 n/a 1 cross.bmp 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The stimuli were photographs of either a famous face (known to most of British or a scrambled face, and appeared for a random duration between 800 and 1,000 ms. Subjects were instructed to fixate centrally throughout the experiment. To ensure attention to each stimulus, participants were asked to press one of two keys with either their left or right index finger (assignment counter-balanced across participants). Their key-press was based on how symmetric they regarded each image: pressing one or the other key depending whether they thought the image was 'more' or 'less symmetric' than average.", + "InstitutionAddress": "15 Chaucer Road, Cambridge, UK", + "InstitutionName": "MRC Cognition & Brain Sciences Unit", + "EEGReference": "nose", + "EEGGround": "left collar bone", + "SamplingFrequency": 250, + "PowerLineFrequency": 50, + "SoftwareFilters": { + "LowPassFilter": { + "cutoff": "350 (Hz)" + } + }, + "EEGPlacementScheme": "extended 10-10% system", + "CapManufacturer": "Easycap", + "EEGChannelCount": 70, + "EOGChannelCount": 2, + "RecordingType": "continuous", + "MiscChannelCount": 309, + "RecordingDuration": 505, + "ECGChannelCount": 0, + "EMGChannelCount": 0 +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-3_eeg.set b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-3_eeg.set new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-3_events.tsv b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-3_events.tsv new file mode 100644 index 00000000..252eb3b6 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/eeg/sub-002_task-FacePerception_run-3_events.tsv @@ -0,0 +1,200 @@ +onset duration sample event_type face_type rep_status trial rep_lag value stim_file +24.5989090909 n/a 6149.7273 show_face_initial unfamiliar_face first_show 1 n/a 13 u097.bmp +25.3198181818 n/a 6329.9545 right_press n/a n/a 1 n/a 4096 n/a +25.4325454545 n/a 6358.1364 show_circle n/a n/a 1 n/a 0 circle.bmp +27.1325454545 n/a 6783.1364 show_cross n/a n/a 2 n/a 1 cross.bmp +27.6225454545 n/a 6905.6364 show_face unfamiliar_face immediate_repeat 2 1 14 u097.bmp +28.1198181818 n/a 7029.9545 right_press n/a n/a 2 n/a 4096 n/a +28.5952727273 n/a 7148.8182 show_circle n/a n/a 2 n/a 0 circle.bmp 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51036.5455 right_press n/a n/a 57 n/a 4096 n/a +204.4789090909 n/a 51119.7273 show_circle n/a n/a 57 n/a 0 circle.bmp diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/sub-002_scans.json b/datasets/eeg_ds003645s_hed_demo/sub-002/sub-002_scans.json new file mode 100644 index 00000000..c59591c5 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/sub-002_scans.json @@ -0,0 +1,18 @@ +{ + "condition": { + "LongName": "Event category", + "Description": "The experimental condition", + "Levels": { + "left_sym": "Setup for experiment where pressing key with left index finger means a face with above average symmetry.", + "right_sym": "Setup for experiment where pressing key with right index finger means a face with above average symmetry." + }, + "HED": { + "left_sym": "Experiment-structure, Condition-variable/Left-key-for-sym-face, Description/Left index finger key press indicates a face with above average symmetry.", + "right_sym": "Experiment-structure, Condition-variable/Right-key-for-sym-face, Description/Right index finger key press indicates a face with above average symmetry." + } + }, + "acq_time": { + "Description": "Time when first data point was acquired.", + "HED": "Creation-date/#" + } +} diff --git a/datasets/eeg_ds003645s_hed_demo/sub-002/sub-002_scans.tsv b/datasets/eeg_ds003645s_hed_demo/sub-002/sub-002_scans.tsv new file mode 100644 index 00000000..916ee482 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-002/sub-002_scans.tsv @@ -0,0 +1,4 @@ +filename acq_time condition HED +eeg/sub-002_task-FacePerception_run-1_eeg.set 1877-06-15T13:45:30 right_sym Experimental-note/Participant moved extensively on this run. +eeg/sub-002_task-FacePerception_run-2_eeg.set 1877-06-15T15:55:33 right_sym Experimental-note/Loud noise outside lab. +eeg/sub-002_task-FacePerception_run-3_eeg.set 1877-06-15T18:15:27 right_sym Experimental-note/Participant took restroom break. diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_channels.tsv b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_channels.tsv new file mode 100644 index 00000000..3020ecb7 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_channels.tsv @@ -0,0 +1,382 @@ +name type units +MEG0113 MISC n/a +MEG0112 MISC n/a +MEG0111 MISC n/a +MEG0122 MISC n/a +MEG0123 MISC n/a +MEG0121 MISC n/a +MEG0132 MISC n/a +MEG0133 MISC n/a +MEG0131 MISC n/a +MEG0143 MISC n/a +MEG0142 MISC n/a +MEG0141 MISC n/a +MEG0213 MISC n/a +MEG0212 MISC n/a +MEG0211 MISC n/a +MEG0222 MISC n/a +MEG0223 MISC n/a +MEG0221 MISC n/a +MEG0232 MISC n/a +MEG0233 MISC n/a +MEG0231 MISC n/a +MEG0243 MISC n/a +MEG0242 MISC n/a +MEG0241 MISC n/a +MEG0313 MISC n/a +MEG0312 MISC n/a +MEG0311 MISC n/a +MEG0322 MISC n/a +MEG0323 MISC n/a +MEG0321 MISC n/a +MEG0333 MISC n/a +MEG0332 MISC n/a +MEG0331 MISC n/a +MEG0343 MISC n/a +MEG0342 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+EEG059 EEG microV +EEG060 EEG microV +EEG061 HEOG n/a +EEG062 VEOG n/a +EEG063 MISC n/a +EEG064 MISC n/a +EEG065 EEG microV +EEG066 EEG microV +EEG067 EEG microV +EEG068 EEG microV +EEG069 EEG microV +EEG070 EEG microV +EEG071 EEG microV +EEG072 EEG microV +EEG073 EEG microV +EEG074 EEG microV +STI101 n/a n/a diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_eeg.json b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_eeg.json new file mode 100644 index 00000000..16428806 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_eeg.json @@ -0,0 +1,24 @@ +{ + "TaskName": "FacePerception", + "TaskDescription": "Subjects viewed stimuli on a screen during six, 7.5 minute runs. The stimuli were photographs of either a famous face (known to most of British or a scrambled face, and appeared for a random duration between 800 and 1,000 ms. Subjects were instructed to fixate centrally throughout the experiment. To ensure attention to each stimulus, participants were asked to press one of two keys with either their left or right index finger (assignment counter-balanced across participants). Their key-press was based on how symmetric they regarded each image: pressing one or the other key depending whether they thought the image was 'more' or 'less symmetric' than average.", + "InstitutionAddress": "15 Chaucer Road, Cambridge, UK", + "InstitutionName": "MRC Cognition & Brain Sciences Unit", + "EEGReference": "nose", + "EEGGround": "left collar bone", + "SamplingFrequency": 250, + "PowerLineFrequency": 50, + "SoftwareFilters": { + "LowPassFilter": { + "cutoff": "350 (Hz)" + } + }, + "EEGPlacementScheme": "extended 10-10% system", + "CapManufacturer": "Easycap", + "EEGChannelCount": 70, + "EOGChannelCount": 2, + "RecordingType": "continuous", + "MiscChannelCount": 309, + "RecordingDuration": 494, + "ECGChannelCount": 0, + "EMGChannelCount": 0 +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_eeg.set b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_eeg.set new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_events.tsv b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_events.tsv new file mode 100644 index 00000000..dc5fd722 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-1_events.tsv @@ -0,0 +1,200 @@ +onset duration sample event_type face_type rep_status trial rep_lag value stim_file +25.1161818182 n/a 6279.0455 show_face_initial famous_face first_show 1 n/a 5 f074.bmp +25.9789090909 n/a 6494.7273 show_circle n/a n/a 1 n/a 0 circle.bmp +26.0261818182 n/a 6506.5455 left_press n/a n/a 1 n/a 256 n/a +27.678909090900003 n/a 6919.7273 show_cross n/a n/a 2 n/a 1 cross.bmp +28.1734545455 n/a 7043.3636 show_face unfamiliar_face first_show 2 n/a 13 u011.bmp +29.0598181818 n/a 7264.9545 show_circle n/a n/a 2 n/a 0 circle.bmp +29.1116363636 n/a 7277.9091 left_press n/a n/a 2 n/a 256 n/a +30.7598181818 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b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_channels.tsv new file mode 100644 index 00000000..3020ecb7 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_channels.tsv @@ -0,0 +1,382 @@ +name type units +MEG0113 MISC n/a +MEG0112 MISC n/a +MEG0111 MISC n/a +MEG0122 MISC n/a +MEG0123 MISC n/a +MEG0121 MISC n/a +MEG0132 MISC n/a +MEG0133 MISC n/a +MEG0131 MISC n/a +MEG0143 MISC n/a +MEG0142 MISC n/a +MEG0141 MISC n/a +MEG0213 MISC n/a +MEG0212 MISC n/a +MEG0211 MISC n/a +MEG0222 MISC n/a +MEG0223 MISC n/a +MEG0221 MISC n/a +MEG0232 MISC n/a +MEG0233 MISC n/a +MEG0231 MISC n/a +MEG0243 MISC n/a +MEG0242 MISC n/a +MEG0241 MISC n/a +MEG0313 MISC n/a +MEG0312 MISC n/a +MEG0311 MISC n/a +MEG0322 MISC n/a +MEG0323 MISC n/a +MEG0321 MISC n/a +MEG0333 MISC n/a +MEG0332 MISC n/a +MEG0331 MISC n/a +MEG0343 MISC n/a +MEG0342 MISC n/a +MEG0341 MISC n/a +MEG0413 MISC n/a +MEG0412 MISC n/a +MEG0411 MISC n/a +MEG0422 MISC 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The stimuli were photographs of either a famous face (known to most of British or a scrambled face, and appeared for a random duration between 800 and 1,000 ms. Subjects were instructed to fixate centrally throughout the experiment. To ensure attention to each stimulus, participants were asked to press one of two keys with either their left or right index finger (assignment counter-balanced across participants). Their key-press was based on how symmetric they regarded each image: pressing one or the other key depending whether they thought the image was 'more' or 'less symmetric' than average.", + "InstitutionAddress": "15 Chaucer Road, Cambridge, UK", + "InstitutionName": "MRC Cognition & Brain Sciences Unit", + "EEGReference": "nose", + "EEGGround": "left collar bone", + "SamplingFrequency": 250, + "PowerLineFrequency": 50, + "SoftwareFilters": { + "LowPassFilter": { + "cutoff": "350 (Hz)" + } + }, + "EEGPlacementScheme": "extended 10-10% system", + "CapManufacturer": "Easycap", + "EEGChannelCount": 70, + "EOGChannelCount": 2, + "RecordingType": "continuous", + "MiscChannelCount": 309, + "RecordingDuration": 493, + "ECGChannelCount": 0, + "EMGChannelCount": 0 +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_eeg.set b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_eeg.set new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_events.tsv b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_events.tsv new file mode 100644 index 00000000..bda91fd4 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-2_events.tsv @@ -0,0 +1,200 @@ +onset duration sample event_type face_type rep_status trial rep_lag value stim_file +25.0143636364 n/a 6253.5909 show_face_initial famous_face first_show 1 n/a 5 f108.bmp +25.8598181818 n/a 6464.9545 right_press n/a n/a 1 n/a 4096 n/a +25.9516363636 n/a 6487.9091 show_circle n/a n/a 1 n/a 0 circle.bmp +27.6516363636 n/a 6912.9091 show_cross n/a n/a 2 n/a 1 cross.bmp +28.2552727273 n/a 7063.8182 show_face scrambled_face first_show 2 n/a 17 s141.bmp +28.9170909091 n/a 7229.2727 left_press n/a n/a 2 n/a 256 n/a +29.2725454545 n/a 7318.1364 show_circle n/a n/a 2 n/a 0 circle.bmp +30.9725454545 n/a 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+EEG059 EEG microV +EEG060 EEG microV +EEG061 HEOG n/a +EEG062 VEOG n/a +EEG063 MISC n/a +EEG064 MISC n/a +EEG065 EEG microV +EEG066 EEG microV +EEG067 EEG microV +EEG068 EEG microV +EEG069 EEG microV +EEG070 EEG microV +EEG071 EEG microV +EEG072 EEG microV +EEG073 EEG microV +EEG074 EEG microV +STI101 n/a n/a diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_eeg.json b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_eeg.json new file mode 100644 index 00000000..acc6c949 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_eeg.json @@ -0,0 +1,24 @@ +{ + "TaskName": "FacePerception", + "TaskDescription": "Subjects viewed stimuli on a screen during six, 7.5 minute runs. The stimuli were photographs of either a famous face (known to most of British or a scrambled face, and appeared for a random duration between 800 and 1,000 ms. Subjects were instructed to fixate centrally throughout the experiment. To ensure attention to each stimulus, participants were asked to press one of two keys with either their left or right index finger (assignment counter-balanced across participants). Their key-press was based on how symmetric they regarded each image: pressing one or the other key depending whether they thought the image was 'more' or 'less symmetric' than average.", + "InstitutionAddress": "15 Chaucer Road, Cambridge, UK", + "InstitutionName": "MRC Cognition & Brain Sciences Unit", + "EEGReference": "nose", + "EEGGround": "left collar bone", + "SamplingFrequency": 250, + "PowerLineFrequency": 50, + "SoftwareFilters": { + "LowPassFilter": { + "cutoff": "350 (Hz)" + } + }, + "EEGPlacementScheme": "extended 10-10% system", + "CapManufacturer": "Easycap", + "EEGChannelCount": 70, + "EOGChannelCount": 2, + "RecordingType": "continuous", + "MiscChannelCount": 309, + "RecordingDuration": 492, + "ECGChannelCount": 0, + "EMGChannelCount": 0 +} \ No newline at end of file diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_eeg.set b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_eeg.set new file mode 100644 index 00000000..e69de29b diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_events.tsv b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_events.tsv new file mode 100644 index 00000000..0402a568 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/eeg/sub-003_task-FacePerception_run-3_events.tsv @@ -0,0 +1,200 @@ +onset duration sample event_type face_type rep_status trial rep_lag value stim_file +27.5589090909 n/a 6889.7273 show_face_initial scrambled_face first_show 1 n/a 17 s044.bmp +28.2207272727 n/a 7055.1818 left_press n/a n/a 1 n/a 256 n/a +28.4352727273 n/a 7108.8182 show_circle n/a n/a 1 n/a 0 circle.bmp +30.1352727273 n/a 7533.8182 show_cross n/a n/a 2 n/a 1 cross.bmp +30.7489090909 n/a 7687.2273 show_face scrambled_face immediate_repeat 2 1 18 s044.bmp +31.3243636364 n/a 7831.0909 left_press n/a n/a 2 n/a 256 n/a +31.6498181818 n/a 7912.4545 show_circle n/a n/a 2 n/a 0 circle.bmp 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+174.3807272727 n/a 43595.1818 right_press n/a n/a 47 n/a 4096 n/a +176.0698181818 n/a 44017.4545 show_cross n/a n/a 48 n/a 1 cross.bmp +176.5689090909 n/a 44142.2273 show_face unfamiliar_face delayed_repeat 48 11 15 u089.bmp +177.3143636364 n/a 44328.5909 right_press n/a n/a 48 n/a 4096 n/a +177.5352727273 n/a 44383.8182 show_circle n/a n/a 48 n/a 0 circle.bmp +179.2352727273 n/a 44808.8182 show_cross n/a n/a 49 n/a 1 cross.bmp +179.7598181818 n/a 44939.9545 show_face unfamiliar_face first_show 49 n/a 13 u044.bmp +180.3743636364 n/a 45093.5909 left_press n/a n/a 49 n/a 256 n/a +180.7252727273 n/a 45181.3182 show_circle n/a n/a 49 n/a 0 circle.bmp +182.4252727273 n/a 45606.3182 show_cross n/a n/a 50 n/a 1 cross.bmp +183.0507272727 n/a 45762.6818 show_face unfamiliar_face first_show 50 n/a 13 u086.bmp +183.7498181818 n/a 45937.4545 left_press n/a n/a 50 n/a 256 n/a +183.8734545455 n/a 45968.3636 show_circle n/a n/a 50 n/a 0 circle.bmp diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/sub-003_scans.json b/datasets/eeg_ds003645s_hed_demo/sub-003/sub-003_scans.json new file mode 100644 index 00000000..63a45179 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/sub-003_scans.json @@ -0,0 +1,18 @@ +{ + "condition": { + "LongName": "Event category", + "Description": "The experimental condition", + "Levels": { + "left_sym": "Setup for experiment where pressing key with left index finger means a face with above average symmetry.", + "right_sym": "Setup for experiment where pressing key with right index finger means a face with above average symmetry." + }, + "HED": { + "left_sym": "Experiment-structure, Condition-variable/Left-key-for-sym, Description/Left index finger key press indicates a face with above average symmetry.", + "right_sym": "Experiment-structure, Condition-variable/Right-key-for-sym, Description/Right index finger key press indicates a face with above average symmetry." + } + }, + "acq_time": { + "Description": "Time when first data point was acquired.", + "HED": "Creation-date/#" + } +} diff --git a/datasets/eeg_ds003645s_hed_demo/sub-003/sub-003_scans.tsv b/datasets/eeg_ds003645s_hed_demo/sub-003/sub-003_scans.tsv new file mode 100644 index 00000000..0e52eb93 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/sub-003/sub-003_scans.tsv @@ -0,0 +1,4 @@ +filename acq_time condition HED +eeg/sub-003_task-FacePerception_run-1_eeg.set 1877-07-15T13:45:30 left_sym Experimental-note/Participant moved extensively on this run. +eeg/sub-003_task-FacePerception_run-2_eeg.set 1877-07-15T15:55:33 left_sym Experimental-note/Loud noise outside lab. +eeg/sub-003_task-FacePerception_run-3_eeg.set 1877-07-15T18:15:27 left_sym Experimental-note/Participant took restroom break. diff --git a/datasets/eeg_ds003645s_hed_demo/task-FacePerception_events.json b/datasets/eeg_ds003645s_hed_demo/task-FacePerception_events.json new file mode 100644 index 00000000..ae930eb8 --- /dev/null +++ b/datasets/eeg_ds003645s_hed_demo/task-FacePerception_events.json @@ -0,0 +1,124 @@ +{ + "onset": { + "Description": "Position of event marker in seconds relative to the start.", + "Units": "s" + }, + "duration": { + "Description": "Duration of the event in seconds.", + "Units": "s" + }, + "event_type": { + "LongName": "Event category", + "Description": "The main category of the event.", + "Levels": { + "show_face": "Display a face to mark end of pre-stimulus and start of blink-inhibition.", + "show_face_initial": "Display a face at the beginning of the recording.", + "show_circle": "Display a white circle to mark end of the stimulus and blink inhibition.", + "show_cross": "Display only a white cross to mark start of trial and fixation.", + "left_press": "Experiment participant presses a key with left index finger.", + "right_press": "Experiment participant presses a key with right index finger.", + "double_press": "Experiment participant presses both keys ." + }, + "HED": { + "show_face": "Sensory-event, Experimental-stimulus, (Def/Face-image, ({face_type}, {rep_status}, {rep_lag}, {stim_file}), Onset), (Def/Blink-inhibition-task,Onset),(Def/Cross-only, Offset)", + "show_face_initial": "Sensory-event, Experimental-stimulus, (Def/Face-image, ({face_type}, {rep_status}, {rep_lag}, {stim_file}), Onset), (Def/Blink-inhibition-task,Onset), (Def/Fixation-task, Onset)", + "show_circle": "Sensory-event, (Intended-effect, Cue), (Def/Circle-only, Onset), (Def/Face-image, Offset), (Def/Blink-inhibition-task, Offset), (Def/Fixation-task, Offset)", + "show_cross": "Sensory-event, (Intended-effect, Cue), (Def/Cross-only, Onset), (Def/Fixation-task, Onset), (Def/Circle-only, Offset)", + "left_press": "Agent-action, Participant-response, Def/Press-left-finger", + "right_press": "Agent-action, Participant-response, Def/Press-right-finger", + "double_press": "Agent-action, Indeterminate-action, (Press, Keyboard-key)" + } + }, + "face_type": { + "Description": "Factor indicating type of face image being displayed.", + "Levels": { + "famous_face": "A face that should be recognized by the participants.", + "unfamiliar_face": "A face that should not be recognized by the participants.", + "scrambled_face": "A scrambled face image generated by taking face 2D FFT." + }, + "HED": { + "famous_face": "Def/Famous-face-cond", + "unfamiliar_face": "Def/Unfamiliar-face-cond", + "scrambled_face": "Def/Scrambled-face-cond" + } + }, + "rep_status": { + "Description": "Factor indicating whether this image has been already seen.", + "Levels": { + "first_show": "Factor level indicating the first display of this face.", + "immediate_repeat": "Factor level indicating this face was the same as previous one.", + "delayed_repeat": "Factor level indicating face was seen 5 to 15 trials ago." + }, + "HED": { + "first_show": "Def/First-show-cond", + "immediate_repeat": "Def/Immediate-repeat-cond", + "delayed_repeat": "Def/Delayed-repeat-cond" + } + }, + "trial": { + "Description": "Indicates which trial this event belongs to." + }, + "rep_lag": { + "Description": "How face images before this one was the image was previously presented.", + "HED": "Item-interval/#" + }, + "stim_file": { + "Description": "Path of the stimulus file in the stimuli directory.", + "HED": "Image, Pathname/#" + }, + "hed_def_sensory": { + "Description": "Metadata dictionary for gathering sensory definitions", + "HED": { + "cross_only_def": "(Definition/Cross-only, (Visual-presentation, (Foreground-view, (White, Cross), (Center-of, Computer-screen)), (Background-view, Black), Description/A white fixation cross on a black background in the center of the screen.))", + "face_image_def": "(Definition/Face-image, (Visual-presentation, (Foreground-view, ((Image, Face, Hair), Color/Grayscale), ((White, Cross), (Center-of, Computer-screen))), (Background-view, Black), Description/A happy or neutral face in frontal or three-quarters frontal pose with long hair cropped presented as an achromatic foreground image on a black background with a white fixation cross superposed.))", + "circle_only_def": "(Definition/Circle-only, (Visual-presentation, (Foreground-view, ((White, Circle), (Center-of, Computer-screen))), (Background-view, Black), Description/A white circle on a black background in the center of the screen.))" + } + }, + "hed_def_actions": { + "Description": "Metadata dictionary for gathering participant action definitions", + "HED": { + "press_left_finger_def": "(Definition/Press-left-finger, ((Index-finger, (Left-side-of, Experiment-participant)), (Press, Keyboard-key), Description/The participant presses a key with the left index finger to indicate a face symmetry judgment.))", + "press_right_finger_def": "(Definition/Press-right-finger, ((Index-finger, (Right-side-of, Experiment-participant)), (Press, Keyboard-key), Description/The participant presses a key with the right index finger to indicate a face symmetry evaluation.))" + } + }, + "hed_def_conds": { + "Description": "Metadata dictionary for gathering experimental condition definitions", + "HED": { + "famous_face_cond_def": "(Definition/Famous-face-cond, (Condition-variable/Face-type, (Image, (Face, Famous)), Description/A face that should be recognized by the participants))", + "unfamiliar_face_cond_def": "(Definition/Unfamiliar-face-cond, (Condition-variable/Face-type, (Image, (Face, Unfamiliar)), Description/A face that should not be recognized by the participants.))", + "scrambled_face_cond_def": "(Definition/Scrambled-face-cond, (Condition-variable/Face-type, (Image, (Face, Disordered)), Description/A scrambled face image generated by taking face 2D FFT.))", + "first_show_cond_def": "(Definition/First-show-cond, ((Condition-variable/Repetition-type, (Item-count/1, Face), Item-interval/0), Description/Factor level indicating the first display of this face.))", + "immediate_repeat_cond_def": "(Definition/Immediate-repeat-cond, ((Condition-variable/Repetition-type, (Item-count/2, Face), Item-interval/1), Description/Factor level indicating this face was the same as previous one.))", + "delayed_repeat_cond_def": "(Definition/Delayed-repeat-cond, (Condition-variable/Repetition-type, (Item-count/2, Face), (Item-interval, (Greater-than-or-equal-to, Item-interval/5)), Description/Factor level indicating face was seen 5 to 15 trials ago.))" + } + }, + "hed_def_tasks": { + "Description": "Metadata dictionary for gathering task definitions", + "HED": { + "face_symmetry_evaluation_task_def": "(Definition/Face-symmetry-evaluation-task, (Task, Experiment-participant, (See, Face), (Discriminate, (Face, Symmetrical)), (Press, Keyboard-key), Description/Evaluate degree of image symmetry and respond with key press evaluation.))", + "blink_inhibition_task_def": "(Definition/Blink-inhibition-task, (Task, Experiment-participant, Inhibit-blinks, Description/Do not blink while the face image is displayed.))", + "fixation_task_def": "(Definition/Fixation-task, (Task, Experiment-participant, (Fixate, Cross), Description/Fixate on the cross at the screen center.))" + } + }, + "value": { + "Description": "Numerical event marker", + "Levels": { + "x0": "Disappearance of face image and display of the inter-stimulus circle simultaneously", + "x1": "Disappearance of face image and display of the inter-stimulus circle simultaneously", + "x2": "Initial setup with left finger key press indicating above average symmetry", + "x3": "Initial setup with right finger key press indicating above average symmetry", + "x5": "Initial presentation of famous face", + "x6": "Immediate repeated presentation of famous face", + "x7": "Delayed repeated presentation of famous face", + "x13": "Initial presentation of unfamiliar face", + "x14": "Immediate repeated presentation of unfamiliar face", + "x15": "Delayed repeated presentation of unfamiliar face", + "x17": "Initial presentation of scrambled face", + "x18": "Immediate repeated presentation of scrambled face", + "x19": "Delayed repeated presentation of scrambled face", + "x256": "Left finger key press", + "x4096": "Right finger key press", + "x4352": "Left and right finger key presses" + } + } +}