DESCRIPTION

Package: ChIPseqStepByStep
Type: Package
Title: Integrated analysis and visualization of ChIP-seq data using ChIPpeakAnno, GeneNetworkBuilder and TrackViewer
Version: 0.99.1
Author: Jianhong Ou, Jun Yu, Lihua Julie Zhu
Maintainer: Jianhong Ou <jianhong.ou@gmail.com>
Description: Chromatin immuno-precipitation followed by DNA sequencing (ChIP-seq) 
    has become the most prevalent high throughput technology for the genome-wide 
    identification of the binding sites of transcription factors and histone 
    modification. In this workshop, attendants will gain knowledge and hands-on 
    experiences on analyzing ChIP-seq dataset using several Bioconductor 
    packages such as ChIPpeakAnno, GeneNetorkBuilder and TrackViewer.
Depends:
    R (>= 3.4)
Imports:
    ChIPpeakAnno,
    GeneNetworkBuilder,
    motifStack,
    rtracklayer,
    ChIPQC,
    ggplot2,
    grid,
    org.Hs.eg.db,
    knitr,
    trackViewer,
    Rgraphviz,
    BiocStyle
License: GPL (>= 2)
LazyData: TRUE
VignetteBuilder: knitr
RoxygenNote: 6.0.1
biocViews: Sequencing, ChIPseq, GeneRegulation, QualityControl