The following use cases illustrate applications of CoMorMent containers:
- gwas_demo.md describes how to run a demo GWAS analysis with
plink2andregeniefollowing the CoMorMent specification. - gwas_real.md illustrates usage of gwas.py analysis on MoBa height and depression phenotypes
- mixer_simu.md describes how to run MiXeR analysis on synthetic data from simu_linux
- mixer_real.md describes how to run MiXeR analysis on schizophrenia vs intelligence GWAS
- ldsc_real.md describes how to run LDSC analysis on intelligence vs morningness summary statistics