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duplex and nanopolish still make sense after assembly ? #1110

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DelphIONe opened this issue Sep 12, 2023 · 1 comment

DelphIONe commented Sep 12, 2023

I wonder if the use of Nanopolish after a canu assembly processed on duplex reads is still of interest in your opinion? If yes, is it possible ?

Thanks Jared for your answer and your work in this tool :-)

Owner

jts commented Sep 12, 2023

I don't think it is worth it, I would try medaka instead.

Jared

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