From 1b83a8dcbdef9b53c0b5a445b7965b00852d871e Mon Sep 17 00:00:00 2001 From: Justin Xu Date: Tue, 24 Sep 2024 07:07:09 +0100 Subject: [PATCH] Undo restructured text links --- docs/source/notebooks/examples.ipynb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/source/notebooks/examples.ipynb b/docs/source/notebooks/examples.ipynb index 61f0283..9a416ae 100644 --- a/docs/source/notebooks/examples.ipynb +++ b/docs/source/notebooks/examples.ipynb @@ -6,7 +6,7 @@ "source": [ "# Task Examples\n", "\n", - "Provided below are two examples of mortality prediction tasks that ACES could easily extract subject cohorts for. The configurations have been tested all the provided synthetic data in the repository (`sample_data/ `_), as well as the MIMIC-IV dataset loaded using MEDS & ESGPT (with very minor changes to the below predicate definition). The configuration files for both of these tasks are provided in the repository ([`sample_configs/`](https://github.com/justin13601/ACES/tree/main/sample_configs)), and cohorts can be extracted using the `aces-cli` tool:\n", + "Provided below are two examples of mortality prediction tasks that ACES could easily extract subject cohorts for. The configurations have been tested all the provided synthetic data in the repository (`[sample_data/](https://github.com/justin13601/ACES/tree/main/sample_data`), as well as the MIMIC-IV dataset loaded using MEDS & ESGPT (with very minor changes to the below predicate definition). The configuration files for both of these tasks are provided in the repository ([sample_configs/](https://github.com/justin13601/ACES/tree/main/sample_configs)), and cohorts can be extracted using the `aces-cli` tool:\n", "\n", "```bash\n", "aces-cli data.path='/path/to/MIMIC/ESGPT/schema/' data.standard='esgpt' cohort_dir='sample_configs/' cohort_name='...'\n",