From 59389ae517cb569fc86962364e1a762a4f6e5bc2 Mon Sep 17 00:00:00 2001 From: Yu-An Chen Date: Mon, 11 Sep 2023 19:06:46 -0700 Subject: [PATCH] Update defaults.yml (#517) --- config/defaults.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/config/defaults.yml b/config/defaults.yml index 7c06f803..f6fc2b87 100644 --- a/config/defaults.yml +++ b/config/defaults.yml @@ -45,10 +45,10 @@ modules: - name: imagej-rolling-ball container: yuanchen12/imagej-rolling-ball - version: v2023.8.6 + version: v2023.9.1 cmd: |- cp ${marker} markers_bs.csv && \ - rolling-ball --imagej_version="/tmp/Fiji.app" ${image} + rolling-ball --imagej_version="/home/mambauser/Fiji.app" ${image} segmentation: - name: unmicst @@ -100,7 +100,7 @@ modules: watershed: name: s3seg container: labsyspharm/s3segmenter - version: 1.5.3 + version: 1.5.5 channel: --probMapChan idxbase: 1 quantification: