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testing.html
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<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8" />
<meta name="generator" content="pandoc" />
<meta http-equiv="X-UA-Compatible" content="IE=EDGE" />
<meta name="viewport" content="width=device-width, initial-scale=1" />
<meta name="author" content="Vignette Author" />
<meta name="date" content="2020-12-06" />
<title>Vignette Title</title>
<script>// Hide empty <a> tag within highlighted CodeBlock for screen reader accessibility (see https://github.com/jgm/pandoc/issues/6352#issuecomment-626106786) -->
// v0.0.1
// Written by JooYoung Seo ([email protected]) and Atsushi Yasumoto on June 1st, 2020.
document.addEventListener('DOMContentLoaded', function() {
const codeList = document.getElementsByClassName("sourceCode");
for (var i = 0; i < codeList.length; i++) {
var linkList = codeList[i].getElementsByTagName('a');
for (var j = 0; j < linkList.length; j++) {
if (linkList[j].innerHTML === "") {
linkList[j].setAttribute('aria-hidden', 'true');
}
}
}
});
</script>
<style type="text/css">
a.anchor-section {margin-left: 10px; visibility: hidden; color: inherit;}
a.anchor-section::before {content: '#';}
.hasAnchor:hover a.anchor-section {visibility: visible;}
</style>
<script>// Anchor sections v1.0 written by Atsushi Yasumoto on Oct 3rd, 2020.
document.addEventListener('DOMContentLoaded', function() {
// Do nothing if AnchorJS is used
if (typeof window.anchors === 'object' && anchors.hasOwnProperty('hasAnchorJSLink')) {
return;
}
const h = document.querySelectorAll('h1, h2, h3, h4, h5, h6');
// Do nothing if sections are already anchored
if (Array.from(h).some(x => x.classList.contains('hasAnchor'))) {
return null;
}
// Use section id when pandoc runs with --section-divs
const section_id = function(x) {
return ((x.classList.contains('section') || (x.tagName === 'SECTION'))
? x.id : '');
};
// Add anchors
h.forEach(function(x) {
const id = x.id || section_id(x.parentElement);
if (id === '') {
return null;
}
let anchor = document.createElement('a');
anchor.href = '#' + id;
anchor.classList = ['anchor-section'];
x.classList.add('hasAnchor');
x.appendChild(anchor);
});
});
</script>
<style type="text/css">
code{white-space: pre-wrap;}
span.smallcaps{font-variant: small-caps;}
span.underline{text-decoration: underline;}
div.column{display: inline-block; vertical-align: top; width: 50%;}
div.hanging-indent{margin-left: 1.5em; text-indent: -1.5em;}
ul.task-list{list-style: none;}
</style>
<style type="text/css">code{white-space: pre;}</style>
<style type="text/css" data-origin="pandoc">
code.sourceCode > span { display: inline-block; line-height: 1.25; }
code.sourceCode > span { color: inherit; text-decoration: inherit; }
code.sourceCode > span:empty { height: 1.2em; }
.sourceCode { overflow: visible; }
code.sourceCode { white-space: pre; position: relative; }
div.sourceCode { margin: 1em 0; }
pre.sourceCode { margin: 0; }
@media screen {
div.sourceCode { overflow: auto; }
}
@media print {
code.sourceCode { white-space: pre-wrap; }
code.sourceCode > span { text-indent: -5em; padding-left: 5em; }
}
pre.numberSource code
{ counter-reset: source-line 0; }
pre.numberSource code > span
{ position: relative; left: -4em; counter-increment: source-line; }
pre.numberSource code > span > a:first-child::before
{ content: counter(source-line);
position: relative; left: -1em; text-align: right; vertical-align: baseline;
border: none; display: inline-block;
-webkit-touch-callout: none; -webkit-user-select: none;
-khtml-user-select: none; -moz-user-select: none;
-ms-user-select: none; user-select: none;
padding: 0 4px; width: 4em;
color: #aaaaaa;
}
pre.numberSource { margin-left: 3em; border-left: 1px solid #aaaaaa; padding-left: 4px; }
div.sourceCode
{ }
@media screen {
code.sourceCode > span > a:first-child::before { text-decoration: underline; }
}
code span.al { color: #ff0000; font-weight: bold; } /* Alert */
code span.an { color: #60a0b0; font-weight: bold; font-style: italic; } /* Annotation */
code span.at { color: #7d9029; } /* Attribute */
code span.bn { color: #40a070; } /* BaseN */
code span.bu { } /* BuiltIn */
code span.cf { color: #007020; font-weight: bold; } /* ControlFlow */
code span.ch { color: #4070a0; } /* Char */
code span.cn { color: #880000; } /* Constant */
code span.co { color: #60a0b0; font-style: italic; } /* Comment */
code span.cv { color: #60a0b0; font-weight: bold; font-style: italic; } /* CommentVar */
code span.do { color: #ba2121; font-style: italic; } /* Documentation */
code span.dt { color: #902000; } /* DataType */
code span.dv { color: #40a070; } /* DecVal */
code span.er { color: #ff0000; font-weight: bold; } /* Error */
code span.ex { } /* Extension */
code span.fl { color: #40a070; } /* Float */
code span.fu { color: #06287e; } /* Function */
code span.im { } /* Import */
code span.in { color: #60a0b0; font-weight: bold; font-style: italic; } /* Information */
code span.kw { color: #007020; font-weight: bold; } /* Keyword */
code span.op { color: #666666; } /* Operator */
code span.ot { color: #007020; } /* Other */
code span.pp { color: #bc7a00; } /* Preprocessor */
code span.sc { color: #4070a0; } /* SpecialChar */
code span.ss { color: #bb6688; } /* SpecialString */
code span.st { color: #4070a0; } /* String */
code span.va { color: #19177c; } /* Variable */
code span.vs { color: #4070a0; } /* VerbatimString */
code span.wa { color: #60a0b0; font-weight: bold; font-style: italic; } /* Warning */
</style>
<script>
// apply pandoc div.sourceCode style to pre.sourceCode instead
(function() {
var sheets = document.styleSheets;
for (var i = 0; i < sheets.length; i++) {
if (sheets[i].ownerNode.dataset["origin"] !== "pandoc") continue;
try { var rules = sheets[i].cssRules; } catch (e) { continue; }
for (var j = 0; j < rules.length; j++) {
var rule = rules[j];
// check if there is a div.sourceCode rule
if (rule.type !== rule.STYLE_RULE || rule.selectorText !== "div.sourceCode") continue;
var style = rule.style.cssText;
// check if color or background-color is set
if (rule.style.color === '' && rule.style.backgroundColor === '') continue;
// replace div.sourceCode by a pre.sourceCode rule
sheets[i].deleteRule(j);
sheets[i].insertRule('pre.sourceCode{' + style + '}', j);
}
}
})();
</script>
<style type="text/css">body {
background-color: #fff;
margin: 1em auto;
max-width: 700px;
overflow: visible;
padding-left: 2em;
padding-right: 2em;
font-family: "Open Sans", "Helvetica Neue", Helvetica, Arial, sans-serif;
font-size: 14px;
line-height: 1.35;
}
#TOC {
clear: both;
margin: 0 0 10px 10px;
padding: 4px;
width: 400px;
border: 1px solid #CCCCCC;
border-radius: 5px;
background-color: #f6f6f6;
font-size: 13px;
line-height: 1.3;
}
#TOC .toctitle {
font-weight: bold;
font-size: 15px;
margin-left: 5px;
}
#TOC ul {
padding-left: 40px;
margin-left: -1.5em;
margin-top: 5px;
margin-bottom: 5px;
}
#TOC ul ul {
margin-left: -2em;
}
#TOC li {
line-height: 16px;
}
table {
margin: 1em auto;
border-width: 1px;
border-color: #DDDDDD;
border-style: outset;
border-collapse: collapse;
}
table th {
border-width: 2px;
padding: 5px;
border-style: inset;
}
table td {
border-width: 1px;
border-style: inset;
line-height: 18px;
padding: 5px 5px;
}
table, table th, table td {
border-left-style: none;
border-right-style: none;
}
table thead, table tr.even {
background-color: #f7f7f7;
}
p {
margin: 0.5em 0;
}
blockquote {
background-color: #f6f6f6;
padding: 0.25em 0.75em;
}
hr {
border-style: solid;
border: none;
border-top: 1px solid #777;
margin: 28px 0;
}
dl {
margin-left: 0;
}
dl dd {
margin-bottom: 13px;
margin-left: 13px;
}
dl dt {
font-weight: bold;
}
ul {
margin-top: 0;
}
ul li {
list-style: circle outside;
}
ul ul {
margin-bottom: 0;
}
pre, code {
background-color: #f7f7f7;
border-radius: 3px;
color: #333;
white-space: pre-wrap;
}
pre {
border-radius: 3px;
margin: 5px 0px 10px 0px;
padding: 10px;
}
pre:not([class]) {
background-color: #f7f7f7;
}
code {
font-family: Consolas, Monaco, 'Courier New', monospace;
font-size: 85%;
}
p > code, li > code {
padding: 2px 0px;
}
div.figure {
text-align: center;
}
img {
background-color: #FFFFFF;
padding: 2px;
border: 1px solid #DDDDDD;
border-radius: 3px;
border: 1px solid #CCCCCC;
margin: 0 5px;
}
h1 {
margin-top: 0;
font-size: 35px;
line-height: 40px;
}
h2 {
border-bottom: 4px solid #f7f7f7;
padding-top: 10px;
padding-bottom: 2px;
font-size: 145%;
}
h3 {
border-bottom: 2px solid #f7f7f7;
padding-top: 10px;
font-size: 120%;
}
h4 {
border-bottom: 1px solid #f7f7f7;
margin-left: 8px;
font-size: 105%;
}
h5, h6 {
border-bottom: 1px solid #ccc;
font-size: 105%;
}
a {
color: #0033dd;
text-decoration: none;
}
a:hover {
color: #6666ff; }
a:visited {
color: #800080; }
a:visited:hover {
color: #BB00BB; }
a[href^="http:"] {
text-decoration: underline; }
a[href^="https:"] {
text-decoration: underline; }
code > span.kw { color: #555; font-weight: bold; }
code > span.dt { color: #902000; }
code > span.dv { color: #40a070; }
code > span.bn { color: #d14; }
code > span.fl { color: #d14; }
code > span.ch { color: #d14; }
code > span.st { color: #d14; }
code > span.co { color: #888888; font-style: italic; }
code > span.ot { color: #007020; }
code > span.al { color: #ff0000; font-weight: bold; }
code > span.fu { color: #900; font-weight: bold; }
code > span.er { color: #a61717; background-color: #e3d2d2; }
</style>
</head>
<body>
<h1 class="title toc-ignore">Vignette Title</h1>
<h4 class="author">Vignette Author</h4>
<h4 class="date">2020-12-06</h4>
<p>Vignettes are long form documentation commonly included in packages. Because they are part of the distribution of the package, they need to be as compact as possible. The <code>html_vignette</code> output type provides a custom style sheet (and tweaks some options) to ensure that the resulting html is as small as possible. The <code>html_vignette</code> format:</p>
<ul>
<li>Never uses retina figures</li>
<li>Has a smaller default figure size</li>
<li>Uses a custom CSS stylesheet instead of the default Twitter Bootstrap style</li>
</ul>
<div id="vignette-info" class="section level2">
<h2>Vignette Info</h2>
<p>Note the various macros within the <code>vignette</code> section of the metadata block above. These are required in order to instruct R how to build the vignette. Note that you should change the <code>title</code> field and the <code>\VignetteIndexEntry</code> to match the title of your vignette.</p>
</div>
<div id="styles" class="section level2">
<h2>Styles</h2>
<p>The <code>html_vignette</code> template includes a basic CSS theme. To override this theme you can specify your own CSS in the document metadata as follows:</p>
<pre><code>output:
rmarkdown::html_vignette:
css: mystyles.css</code></pre>
</div>
<div id="figures" class="section level2">
<h2>Figures</h2>
<p>The figure sizes have been customised so that you can easily put two images side-by-side.</p>
<div class="sourceCode" id="cb2"><pre class="sourceCode r"><code class="sourceCode r"><span id="cb2-1"><a href="#cb2-1"></a><span class="kw">plot</span>(<span class="dv">1</span><span class="op">:</span><span class="dv">10</span>)</span>
<span id="cb2-2"><a href="#cb2-2"></a><span class="kw">plot</span>(<span class="dv">10</span><span class="op">:</span><span class="dv">1</span>)</span></code></pre></div>
<p><img 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/><img src="data:image/png;base64,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" /></p>
<p>You can enable figure captions by <code>fig_caption: yes</code> in YAML:</p>
<pre><code>output:
rmarkdown::html_vignette:
fig_caption: yes</code></pre>
<p>Then you can use the chunk option <code>fig.cap = "Your figure caption."</code> in <strong>knitr</strong>.</p>
</div>
<div id="more-examples" class="section level2">
<h2>More Examples</h2>
<p>You can write math expressions, e.g. <span class="math inline">\(Y = X\beta + \epsilon\)</span>, footnotes<a href="#fn1" class="footnote-ref" id="fnref1"><sup>1</sup></a>, and tables, e.g. using <code>knitr::kable()</code>.</p>
<table>
<thead>
<tr class="header">
<th align="left"></th>
<th align="right">mpg</th>
<th align="right">cyl</th>
<th align="right">disp</th>
<th align="right">hp</th>
<th align="right">drat</th>
<th align="right">wt</th>
<th align="right">qsec</th>
<th align="right">vs</th>
<th align="right">am</th>
<th align="right">gear</th>
<th align="right">carb</th>
</tr>
</thead>
<tbody>
<tr class="odd">
<td align="left">Mazda RX4</td>
<td align="right">21.0</td>
<td align="right">6</td>
<td align="right">160.0</td>
<td align="right">110</td>
<td align="right">3.90</td>
<td align="right">2.620</td>
<td align="right">16.46</td>
<td align="right">0</td>
<td align="right">1</td>
<td align="right">4</td>
<td align="right">4</td>
</tr>
<tr class="even">
<td align="left">Mazda RX4 Wag</td>
<td align="right">21.0</td>
<td align="right">6</td>
<td align="right">160.0</td>
<td align="right">110</td>
<td align="right">3.90</td>
<td align="right">2.875</td>
<td align="right">17.02</td>
<td align="right">0</td>
<td align="right">1</td>
<td align="right">4</td>
<td align="right">4</td>
</tr>
<tr class="odd">
<td align="left">Datsun 710</td>
<td align="right">22.8</td>
<td align="right">4</td>
<td align="right">108.0</td>
<td align="right">93</td>
<td align="right">3.85</td>
<td align="right">2.320</td>
<td align="right">18.61</td>
<td align="right">1</td>
<td align="right">1</td>
<td align="right">4</td>
<td align="right">1</td>
</tr>
<tr class="even">
<td align="left">Hornet 4 Drive</td>
<td align="right">21.4</td>
<td align="right">6</td>
<td align="right">258.0</td>
<td align="right">110</td>
<td align="right">3.08</td>
<td align="right">3.215</td>
<td align="right">19.44</td>
<td align="right">1</td>
<td align="right">0</td>
<td align="right">3</td>
<td align="right">1</td>
</tr>
<tr class="odd">
<td align="left">Hornet Sportabout</td>
<td align="right">18.7</td>
<td align="right">8</td>
<td align="right">360.0</td>
<td align="right">175</td>
<td align="right">3.15</td>
<td align="right">3.440</td>
<td align="right">17.02</td>
<td align="right">0</td>
<td align="right">0</td>
<td align="right">3</td>
<td align="right">2</td>
</tr>
<tr class="even">
<td align="left">Valiant</td>
<td align="right">18.1</td>
<td align="right">6</td>
<td align="right">225.0</td>
<td align="right">105</td>
<td align="right">2.76</td>
<td align="right">3.460</td>
<td align="right">20.22</td>
<td align="right">1</td>
<td align="right">0</td>
<td align="right">3</td>
<td align="right">1</td>
</tr>
<tr class="odd">
<td align="left">Duster 360</td>
<td align="right">14.3</td>
<td align="right">8</td>
<td align="right">360.0</td>
<td align="right">245</td>
<td align="right">3.21</td>
<td align="right">3.570</td>
<td align="right">15.84</td>
<td align="right">0</td>
<td align="right">0</td>
<td align="right">3</td>
<td align="right">4</td>
</tr>
<tr class="even">
<td align="left">Merc 240D</td>
<td align="right">24.4</td>
<td align="right">4</td>
<td align="right">146.7</td>
<td align="right">62</td>
<td align="right">3.69</td>
<td align="right">3.190</td>
<td align="right">20.00</td>
<td align="right">1</td>
<td align="right">0</td>
<td align="right">4</td>
<td align="right">2</td>
</tr>
<tr class="odd">
<td align="left">Merc 230</td>
<td align="right">22.8</td>
<td align="right">4</td>
<td align="right">140.8</td>
<td align="right">95</td>
<td align="right">3.92</td>
<td align="right">3.150</td>
<td align="right">22.90</td>
<td align="right">1</td>
<td align="right">0</td>
<td align="right">4</td>
<td align="right">2</td>
</tr>
<tr class="even">
<td align="left">Merc 280</td>
<td align="right">19.2</td>
<td align="right">6</td>
<td align="right">167.6</td>
<td align="right">123</td>
<td align="right">3.92</td>
<td align="right">3.440</td>
<td align="right">18.30</td>
<td align="right">1</td>
<td align="right">0</td>
<td align="right">4</td>
<td align="right">4</td>
</tr>
</tbody>
</table>
<p>Also a quote using <code>></code>:</p>
<blockquote>
<p>“He who gives up [code] safety for [code] speed deserves neither.” (<a href="https://twitter.com/hadleywickham/status/504368538874703872">via</a>)</p>
</blockquote>
</div>
<div class="footnotes">
<hr />
<ol>
<li id="fn1"><p>A footnote here.<a href="#fnref1" class="footnote-back">↩︎</a></p></li>
</ol>
</div>
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