From 6af2a41679a0699446ad627be8051504548e86fa Mon Sep 17 00:00:00 2001 From: futianfan Date: Tue, 1 Aug 2023 19:26:00 -0500 Subject: [PATCH] fix a bug in TDC-huggingface --- tdc/tdc_hf.py | 13 ++++++++++--- 1 file changed, 10 insertions(+), 3 deletions(-) diff --git a/tdc/tdc_hf.py b/tdc/tdc_hf.py index 21ca7586..51857d22 100644 --- a/tdc/tdc_hf.py +++ b/tdc/tdc_hf.py @@ -3,8 +3,15 @@ import os deeppurpose_repo = [ - 'hERG_Karim_Morgan', - 'BBB_Martins-AttentiveFP' + 'hERG_Karim-Morgan', + 'hERG_Karim-CNN', + 'hERG_Karim-AttentiveFP', + 'BBB_Martins-AttentiveFP', + 'BBB_Martins-Morgan', + 'BBB_Martins-CNN', + 'CYP3A4_Veith-Morgan', + 'CYP3A4_Veith-CNN', + 'CYP3A4_Veith-AttentiveFP', ] class tdc_hf_interface: @@ -82,4 +89,4 @@ def predict_deeppurpose(self, model, drugs): drug_encoding = self.model_name, split_method='no_split') y_pred = model.predict(X_pred)[0] - return y_pred \ No newline at end of file + return y_pred