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Renovate failed to look up the following dependencies: Could not determine new digest for update (docker package ghcr.io/devcontainers/features/github-cli), Could not determine new digest for update (docker package ghcr.io/devcontainers/features/docker-in-docker), Failed to look up docker package docker/dockerfile, Failed to look up docker package continuumio/miniconda3, Failed to look up docker package tensorflow/tensorflow, Failed to look up docker package nfcore/base, Failed to look up docker package ubuntu.
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biocontainers/10x_bamtofastq,biocontainers/abacas,biocontainers/abricate,biocontainers/abritamr,biocontainers/adapterremoval,biocontainers/adapterremovalfixprefix,biocontainers/admixture,biocontainers/agat,biocontainers/agrvate,biocontainers/ale,biocontainers/ampcombi,biocontainers/amplify,biocontainers/angsd,biocontainers/antismash-lite,biocontainers/arcas-hla,biocontainers/argnorm,biocontainers/ariba,biocontainers/arriba,biocontainers/art,biocontainers/artic,biocontainers/ashlar,biocontainers/assembly-scan,biocontainers/ataqv,biocontainers/atlas,biocontainers/atlas-gene-annotation-manipulation,biocontainers/authentict,biocontainers/bakta,biocontainers/bam2fastx,biocontainers/bamaligncleaner,biocontainers/bamclipper,biocontainers/bamcmp,biocontainers/bamstats,biocontainers/bamtools,biocontainers/bamutil,biocontainers/bandage,biocontainers/barrnap,biocontainers/bbmap,biocontainers/bcftools,biocontainers/beagle,biocontainers/bedgovcf,biocontainers/bedops,biocontainers/bedtools,biocontainers/bio_hansel,biocontainers/bioawk,biocontainers/biobambam,biocontainers/bioconductor-affy,biocontainers/bioconductor-anota2seq,biocontainers/bioconductor-deseq2,biocontainers/bioconductor-dupradar,biocontainers/bioconductor-geoquery,biocontainers/bioconductor-rtn,biocontainers/bioconductor-summarizedexperiment,biocontainers/bioconductor-tximeta,biocontainers/bismark,biocontainers/blast,biocontainers/blat,biocontainers/bowtie2,biocontainers/bracken,biocontainers/busco,biocontainers/bwa,biocontainers/bwa-mem2,biocontainers/bwa-meme,biocontainers/bwameth,biocontainers/cafe,biocontainers/cancerit-allelecount,biocontainers/canu,biocontainers/cd-hit,biocontainers/cellsnp-lite,biocontainers/centrifuge,biocontainers/checkm-genome,biocontainers/checkm2,biocontainers/checkv,biocontainers/chewbbaca,biocontainers/chopper,biocontainers/chromap,biocontainers/chromograph,biocontainers/circexplorer2,biocontainers/circularmapper,biocontainers/clame,biocontainers/clipkit,biocontainers/clippy,biocontainers/clonalframeml,biocontainers/clustalo,biocontainers/cmseq,biocontainers/cnvkit,biocontainers/cnvnator,biocontainers/cnvpytor,biocontainers/cobra-meta,biocontainers/concoct,biocontainers/conifer,biocontainers/control-freec,biocontainers/cooler,biocontainers/coptr,biocontainers/coverm,biocontainers/crumble,biocontainers/csvtk,biocontainers/cutadapt,biocontainers/cutesv,biocontainers/damageprofiler,biocontainers/das_tool,biocontainers/dedup,biocontainers/deeparg,biocontainers/deepbgc,biocontainers/deeptools,biocontainers/delly,biocontainers/demuxem,biocontainers/diamond,biocontainers/dragmap,biocontainers/dragonflye,biocontainers/dsh-bio,biocontainers/duphold,biocontainers/ectyper,biocontainers/eggnog-mapper,biocontainers/eigenstratdatabasetools,biocontainers/eklipse,biocontainers/elprep,biocontainers/emboss,biocontainers/emmtyper,biocontainers/endorspy,biocontainers/ensembl-vep,biocontainers/entrez-direct,biocontainers/epa-ng,biocontainers/est-sfs,biocontainers/evigene,biocontainers/expansionhunter,biocontainers/expansionhunterdenovo,biocontainers/falco,biocontainers/famsa,biocontainers/faqcs,biocontainers/fargene,biocontainers/fasta_windows,biocontainers/fastani,biocontainers/fastme,biocontainers/fastp,biocontainers/fastq-scan,biocontainers/fastqc,biocontainers/fastqe,biocontainers/fasttree,biocontainers/fastx_toolkit,biocontainers/ffq,biocontainers/filtlong,biocontainers/flash,biocontainers/foldcomp,biocontainers/foldseek,biocontainers/fq,biocontainers/fqtk,biocontainers/freebayes,biocontainers/freyja,biocontainers/galah,biocontainers/gamma,biocontainers/gangstr,biocontainers/gappa,biocontainers/gatk,biocontainers/gatk4,biocontainers/gatk4-spark,biocontainers/gecco,biocontainers/gem2,biocontainers/gem3-mapper,biocontainers/genmap,biocontainers/genmod,biocontainers/genomad,biocontainers/genomescope2,biocontainers/genometools-genometools,biocontainers/genotyphi,biocontainers/genrich,biocontainers/geofetch,biocontainers/getorganelle,biocontainers/gfaffix,biocontainers/gfastats,biocontainers/gfatools,biocontainers/gffcompare,biocontainers/gffread,biocontainers/gget,biocontainers/glimpse-bio,biocontainers/glnexus,biocontainers/gmm-demux,biocontainers/goat,biocontainers/goleft,biocontainers/grabix,biocontainers/graphmap,biocontainers/graphtyper,biocontainers/gridss,biocontainers/gs-tama,biocontainers/gsea,biocontainers/gtfsort,biocontainers/gubbins,biocontainers/gunc,biocontainers/gvcftools,biocontainers/hamronization,biocontainers/hap-ibd,biocontainers/hap.py,biocontainers/haplocheck,biocontainers/haplogrep,biocontainers/hicap,biocontainers/hicexplorer,biocontainers/hifiasm,biocontainers/hiphase,biocontainers/hisat2,biocontainers/hla-la,biocontainers/hmmcopy,biocontainers/hmmer,biocontainers/hmtnote,biocontainers/homer,biocontainers/hops,biocontainers/hostile,biocontainers/hpsuissero,biocontainers/hts-nim-tools,biocontainers/htseq,biocontainers/htslib,biocontainers/humid,biocontainers/hypo,biocontainers/icount-mini,biocontainers/idemux,biocontain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ntainers/ultraplex,biocontainers/umi_tools,biocontainers/umicollapse,biocontainers/unicycler,biocontainers/upd,biocontainers/variantbam,biocontainers/varlociraptor,biocontainers/vcf2cytosure,biocontainers/vcf2db,biocontainers/vcfanno,biocontainers/vcflib,biocontainers/vcftools,biocontainers/velocyto.py,biocontainers/verifybamid,biocontainers/verifybamid2,biocontainers/vg,biocontainers/viennarna,biocontainers/vireosnp,biocontainers/vrhyme,biocontainers/vsearch,biocontainers/vt,biocontainers/wfmash,biocontainers/wgsim,biocontainers/wisecondorx,biocontainers/xengsort,biocontainers/yahs,biocontainers/yak,biocontainers/yara,community.wave.seqera.io/library/anndata,community.wave.seqera.io/library/annotsv,community.wave.seqera.io/library/biscuit,community.wave.seqera.io/library/cellbender,community.wave.seqera.io/library/coreutils,community.wave.seqera.io/library/datavzrd,community.wave.seqera.io/library/fgbio,community.wave.seqera.io/library/flye,community.wave.seqera.io/library/hmmer,community.wave.seqera.io/library/phantompeakqualtools,community.wave.seqera.io/library/scvi-tools,community.wave.seqera.io/library/sentieon,community.wave.seqera.io/library/sequali)Edited/Blocked
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Renovate failed to look up the following dependencies:
Could not determine new digest for update (docker package ghcr.io/devcontainers/features/github-cli),Could not determine new digest for update (docker package ghcr.io/devcontainers/features/docker-in-docker),Failed to look up docker package docker/dockerfile,Failed to look up docker package continuumio/miniconda3,Failed to look up docker package tensorflow/tensorflow,Failed to look up docker package nfcore/base,Failed to look up docker package ubuntu.Files affected:
.devcontainer/devcontainer.json,modules/nf-core/bclconvert/Dockerfile,modules/nf-core/cellranger/mkfastq/Dockerfile,modules/nf-core/cellrangerarc/Dockerfile,modules/nf-core/cellrangerarc/mkfastq/Dockerfile,modules/nf-core/cellrangeratac/Dockerfile,modules/nf-core/cellrangeratac/mkfastq/Dockerfile,modules/nf-core/coreograph/Dockerfile,modules/nf-core/ensemblvep/Dockerfile,modules/nf-core/quartonotebook/Dockerfile,modules/nf-core/snpeff/Dockerfile,modules/nf-core/spaceranger/Dockerfile,modules/nf-core/xeniumranger/DockerfileIgnored or Blocked
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Detected dependencies
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