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Adding Stimulus CSV #6884

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@yocra3 yocra3 commented Oct 29, 2024 •
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PR checklist

Closes #6871

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

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yocra3 commented Oct 29, 2024

PR developed during hackathon and still in progress.

@yocra3 yocra3 marked this pull request as draft October 29, 2024 13:33
@yocra3 yocra3 marked this pull request as ready for review October 29, 2024 14:29
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@alessiovignoli alessiovignoli alessiovignoli left review comments

@luisas luisas luisas approved these changes

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new module: stimulus/splitcsv
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@yocra3 @luisas @alessiovignoli