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Implement doublet detection methods #14

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3 of 5 tasks
nictru opened this issue Jun 13, 2024 · 1 comment
Open
3 of 5 tasks

Implement doublet detection methods #14

nictru opened this issue Jun 13, 2024 · 1 comment
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enhancement New feature or request overview Meta-issue for tracking related issues

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@nictru
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nictru commented Jun 13, 2024

Description of feature

SOLO has already been implemented. The following have been implemented in YASCP and could easily be adopted:

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  1. enhancement
  2. enhancement
    nictru
  3. Needs conda enhancement
  4. Needs conda enhancement
  5. enhancement

Should probably discuss with the authors of YASCP first, which ones worked best for them

@nictru nictru added enhancement New feature or request overview Meta-issue for tracking related issues labels Jun 13, 2024
@nictru nictru added this to the Stable transcriptomics milestone Jun 13, 2024
@nictru nictru self-assigned this Jun 13, 2024
@grst
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grst commented Jun 13, 2024

doubletFinder came out best in this benchmark and also worked well for me anecdotically.

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