From 7bd7e6f798e2e2d17b70bc71eab9d478183447ea Mon Sep 17 00:00:00 2001
From: Austyn Trull <atrull@uab.edu>
Date: Tue, 13 Aug 2024 13:08:07 -0500
Subject: [PATCH] Changing whitelist input on BLAZE from value to path so that
 the whitelist is symlinked into the working directory correctly

---
 modules/local/blaze.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/local/blaze.nf b/modules/local/blaze.nf
index 5588267..b1a0a18 100644
--- a/modules/local/blaze.nf
+++ b/modules/local/blaze.nf
@@ -11,7 +11,7 @@ process BLAZE {
 
     input:
     tuple val(meta), path(reads)
-    val in_whitelist
+    path in_whitelist
 
     output:
     tuple val(meta), path("*.putative_bc.no_header.csv") , emit: putative_bc